| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1534 |
|---|
| Symbol | |
|---|
| ID | 8828505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1467360 |
|---|
| End bp | 1467779 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF54 |
|---|
| Protein accession | YP_003483902 |
|---|
| Protein GI | 289597206 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAT ACATCTATTT TAGATGCTTT GCCCATGCAA CCGAGGATAT TGATAAGGTA
AGAAAAGCAT TTAAATTCAT AACCCAAAAA GATAATTTTA AGGAGAGGGA AGAAAAGGGC
TATTATGGAA ATAAAATAAT AATTCTTGAA ACAAAAATTA CAAAGAAAAA CGAAGTTGTT
GAATTCTGGA GGAGAATGAA AGATTACGGA ATCGTTGATG AAATTCTCCC TATGTTAGAT
GAAATTGTGG ATGAGCAAGG CATGCTATAC TTGAGGTTTG ATAAGCAGCA GGCGTACTTG
GAAAAGCTAG CCCTGACCAT ACATGGTGAC TCAATAGCAA TGCATGCAAA GCTCGAAAGT
TATCCTATGA AAAAAGGTAA AGCCATAAGC AATTTTAAAA AATTTGTGGA AGAAATTTAA
|
|---|
| Protein sequence | MIKYIYFRCF AHATEDIDKV RKAFKFITQK DNFKEREEKG YYGNKIIILE TKITKKNEVV
EFWRRMKDYG IVDEILPMLD EIVDEQGMLY LRFDKQQAYL EKLALTIHGD SIAMHAKLES
YPMKKGKAIS NFKKFVEEI
|
|---|
| |