Gene Aboo_1525 details

Gene Information

• Locus tag: Aboo_1525
• ID: 8828494
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1459139
• End bp: 1459900
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 34%
• Product: Pseudouridine synthase I, TruA, alpha/beta domain protein
• Protein accession: YP_003483893
• Protein GI: 289597197

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCCTGA AATTTGCCTA TGATGGTACA AGGTTCTATG GATACCAAAG GCAAAAGGAT 
GTACCTACCG TTGAGGGAGA GATTTTGAAA GCCCTTGAAA ATATGGGAAT TAAAAATTTG 
AAAAGTGCTT CACGCACAGA TAGAGGAGTA AGTGCTTTAG GAAATGTGAT ATGGATTAAA 
ACAGATATTG ATGGAAAAGA GCTAATAGGA AGGTTAAATG CAAATTTAAA ACACATCTAT 
TTTCACTCAT TTGCAAATTT GGATATAAAT CCAAGATATG CCAGGATAAG ATGGTACAGG 
TACCATTTAC TCGATATGGG GCAAGATATG GATAGATTGA AAGAAGCAGC CATGATATTT 
CAAGGTGAGC ACGATTTTCG AAATTTCACG AGAGTTAGAA AAAATACAGT AATAGAAATA 
AAAAAAATTG ATGTAAATAA AAGAGGAAGC ATAATCACTA TAGATTTCTA TGGTAGAAAT 
TACCTGTGGA ACTTGATAAG GAGAATAGTA GCCGCCATGG AGACCTACTC CCTCGGCAAA 
GAGTTTGGCC AAGAGATATT TACTATTCGC AAGAATTTTG GAATTGCACC ACCAGAGCCC 
TTGATACTAA TGGATATCCA GTACGATTTT CAATTTGAAA AAATTGGATT TAAGAAAGAT 
ACAAGAAGAT TTTTTTCAAC TAATTTCTTT AGCAGGTACA TCTATTTTTA CTTAGCAAAT 
CCTGAGAAAA ATATAAATCA TTTAAGTTCA TACGACTTTT GA 

 

Protein sequence

MLLKFAYDGT RFYGYQRQKD VPTVEGEILK ALENMGIKNL KSASRTDRGV SALGNVIWIK 
TDIDGKELIG RLNANLKHIY FHSFANLDIN PRYARIRWYR YHLLDMGQDM DRLKEAAMIF 
QGEHDFRNFT RVRKNTVIEI KKIDVNKRGS IITIDFYGRN YLWNLIRRIV AAMETYSLGK 
EFGQEIFTIR KNFGIAPPEP LILMDIQYDF QFEKIGFKKD TRRFFSTNFF SRYIYFYLAN 
PEKNINHLSS YDF