Gene Aboo_1419 details

Gene Information

• Locus tag: Aboo_1419
• ID: 8828383
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1353966
• End bp: 1354502
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 38%
• Product: transcriptional regulator, XRE family
• Protein accession: YP_003483788
• Protein GI: 289597092

Plasmid Coverage information

• Num covering plasmid clones: 57
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAAA AATATATATC GGAAAGGCAT GGGAGATTTG GTGAGATTAT GATTTGTGAA 
TTATGTGGCA AAAATGTACC ACGATTACAT AAAGTTGTGA TAGAAGGCGT GATTATGAAT 
GTTTGTGATG ATTGCGCCAA ATTCGGCAAA GAGATTAAAG GAAATGAAAT ACCAAAGGAT 
GTGAAATATC TGCCCCCTGA AGTTGTAAGG GAGAGGTTGG AGAGGAAGCA GAGGAGAAGA 
AGAAAGGATT ATCTGGATGA GGAGGAAGTA CTAATTGAAG ATTACCCAGA AGTTATAAGG 
AAAGCGAGGG AGAAGATGGG GCTAACTCAA GAGCAACTTG CCAAAAAAAT ACTTGAAAAG 
AAAACGGTTA TCTCAAAGAT TGAAAGGGGA GAAATGCACC CTGATGAAAA GCTAATAAAG 
AAATTAGAAA AGGCGTTGGA TATCAAGCTT AAAGAAAAAG TATCCACCGT TTATCGCAAG 
GATACAAAGA AGAGTGGTGG ATTAACATTG GGAGATTTAA TTAAGGATGC GTTGTAA 

 

Protein sequence

MEQKYISERH GRFGEIMICE LCGKNVPRLH KVVIEGVIMN VCDDCAKFGK EIKGNEIPKD 
VKYLPPEVVR ERLERKQRRR RKDYLDEEEV LIEDYPEVIR KAREKMGLTQ EQLAKKILEK 
KTVISKIERG EMHPDEKLIK KLEKALDIKL KEKVSTVYRK DTKKSGGLTL GDLIKDAL