Gene Aboo_1381 details

Gene Information

• Locus tag: Aboo_1381
• ID: 8828343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1319509
• End bp: 1323063
• Gene Length: 3555 bp
• Protein Length: 1184 aa
• Translation table: 11
• GC content: 39%
• Product: chromosome segregation protein SMC
• Protein accession: YP_003483750
• Protein GI: 289597054

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.530369
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGAAG GTGATGGGAT GTATCTTAAA GCCATTGAGC TTGAAAATTT CAAATCTTTC 
GGAAGGAAGA CCAGATTAGA ATTTAAAGAG GGGTTTACAG CAATTAGCGG TCCAAATGGA 
AGTGGAAAGA GCAATATAAC AGATGCAATT CTCTTCGTTT TGGGTCCAAA ATCTTCAAAG 
AAGATAAGGG CTCAGAGATT AACTGATTTA ATTTACAACG GAGGTAAGAA TGGCAGACCT 
GCGGATTATT GCCGTGTTAG TTTGATTTTT GATAATAGAG ACCGAGTATT ACCCTTGGAT 
GAGGATGAAG TAAAACTTAC GAGATATATA AAGAGAGCAA ACAACGAGCT TGGCTACAAC 
AGCTATTTTT ACATAAATGA TGAGCAGGCG AGGTTGCAAG ATTTTAATTC AATTCTCATT 
CATGCTAAGA TTGAGGCAGA TGGCTACAAC TTTGTGCAGC AGGGAGATGT TACTCGCATA 
GTTGAGATGA CTCCTGTTGA GCGCAGAACA ATATTGGATG ATATTGCAGG CATAACAAAA 
TTCGATAATG AGATAAAGAA AGCTGAAGAT AAGAAGAAGA TAACGGAGGA AAACATGGGG 
AGAATCGAGG CAAGACTTGA TGAGATTAAG AGGAATATGG AAAAACTAGA AAAGGATAGA 
ATGGACGCTC TCAAGTACAA GGAATTGGAG GAGGAGCTAA AGGAGATAAA GGCGAAAATA 
GCATATTTGA ATATGAAAAA AGCGGAGAAT TCCATTGAAT CTTACAATTC TCAACTTAGA 
GAGCTCCAAA GTGCCATAGA TTCTCTTCGA GAAGAGATAG AAAAAAGGAG AAGCGAGGAA 
GAAGAGATAA AGAAGAAAAT TGAAGAAGTG GATGCCAAGA TCCGTTCCAT GGGCAGTGGA 
GAGATCGTGG AGATGAAAAA TAAAATTGAA GAGCTCAAGA TAAAATATGC TGAAGAGAAG 
ATGAAGAAGG AAAACAAGGA AGACAGAATT CAAGAGTACA AAGAGAGAAT AAAAGATTGG 
AACGAGCAGC TCTCTCAGAT AAGGCAGGAG TTAAAGGATA AGGAGGAAGA ACTTAGATCT 
CTAAAAGAGA GGAGAGATGC CATAAGAAAA GAGTATGAAG ACAGAGCCAA GGAATTGGAG 
AACAAAGAGA GAAATTTGGG GAGTGCAAAC GAGAAATTTA GAGAGTTGCA GAGGAGAGCA 
CTAGAAATTC AGGAAGAACT CAAAAAGCTC AGGAACGAGT ATGCCACGAA AGTTGAAGAG 
GAGAACAAGG TTTTGGGCAA TATAAGTAGA ATTAAGGGAG ACATTGCTGC AAAGGAAGAG 
AGTATGAAGG ATATAGAAGC AGCCATAAAA GATGCAGAGT GGAGAATTTC CCAGTTTAAG 
AATGAGAACA AGGATGTAGA GAAGAAAAAG AAAGCTTTAG AAAGCAGGTA CTATGAACTT 
AGAAACGAGG AAACAAAATT GTCCAAGGAA TTAAAGAAGA AAGATAATGA AGTTAAAGAA 
TTAAGCATCG AGTATGAGAA AATCAAAGCT AGGATGGAGA GCAGTCAAGA TGCCCTTAGC 
AGGGCAGTTA TGGCAGTTTT AGCCGCTAGA GATAGGGGGG AGTTGAGAGG CATATATGGA 
ACGATCTCCG AGCTTGGAAA TGTTGATGAT AAATACGCAT TGGCCATAGA GGTGGCTGCA 
GGAAACAGAA TGATGAGCAT AGTGTGTGAG GATGATGAAT CTGCAGCCAA GGCCATAGAA 
TTCTTAAAGA GACATAAATT GGGCAGAGCC ATATTCTTGC CATTAAACAA GATGCTTCGT 
GGAAGACCGA GGGGAAAGGC AATTCTCGCT TCCAGAGATC CCCATGCCAT AGGTTTTGCC 
ATGGACTTAA TAAAATTTGA TCCCAAGTTT GAGGCTGCCT TCTGGTATGT CTTCGGAGAC 
ACTGTTATTG TGGATACTTT AGACAATGCC AGAAAACTCA TGGGCGGTGT TCGCCTGGTC 
ACTTTAGATG GTCAGCTCAT AGAGGCCAGT GGAGCCATGG TTGGCGGCTC TGTTGAGCGT 
AAGAAGAAGG TGAGCATGGG TAACCTTGAT GAGATCGGTA GAAAATTGAG GGAAGCTAGA 
GAGGAGCGGG AAAATATTGA AATGAGATTA AATGCCATAA GGGACGAGTT GGATAGGCTC 
ATTGAAGAGA TAAGGAACAT AAAGACTCAG GATAATTCTG CTCAACTCTC AGTCTGGCTC 
GAAGAGAAGA AGAAAAATCA GGAGAAATTA AAAGATATAA AGAAACAGAT TGAGGAATTA 
GAGAAGGAAA AAAGAAATTA TGAAGAGTTG AGAGAAAGCG TAAGAAATGA GATTGAGAAG 
ATAAAGTCCA AGATTGAAGA TATGGAAAAG GAAGATGCAA ATCTCAGGAA TAGAATGAAC 
AATCTCATTC CTGAAAAGTT ATCCAATGAG ATAAAAGAGC TTCGCAACAT GGTTGATTCT 
CTCAGAAGTA ATCTGCAAAA TGTTGAGAAG GATATAGTTA AGGTTGAAGG CGAGATAAAT 
GGATTAAAAG AAAAGGAAGA TGAAATAACC AAAAATATTG AGAACGCAAA GGAAGAGATT 
AAAAATATGG AAAAAGATAT AGAAAATTCA GAAAAGGTAA TGGAAGATAT ACATCTTGAG 
AGGAGGAAAC TTGAAGAAGT AGTGAGGAAA GAGGAAGAGA AGATAAAGGA CTTAGTAGAT 
GAGAGAGACA AGCTTGTTAA AAATAAGGAG AGGATCGTGA AAGAGATATC CAAGAAAGAG 
GGAGACATAA AAGTAAAGGA TAGTTTAAAG ATACATATCA TCGCAAAACT CAATGAAGAG 
CAGGGAAAAT ACGAAGAAGC AAAGAGAGAA TACGAGAGCT ACGGCATCGA TGTTAAGAAT 
GTCGAATCTA TATCTTCGTT AAAGAATAGA TTAAATGATG TGCAAGCACA AATGATGTCT 
ATGGGTCCCG TCAATATGAG AAGCATAGAG GAGTACGATG AGGAGAAAGA AAGATACGAT 
AAATTGAAGG AAGAGTATAA GAATTTGGAA AAGGAAAAGA AAAATCTACT AGAACTTGTT 
AGGGAATTGA ACGGAAAGAA GAAGGATGGG TTGATGAAGG TTTACAACGC CATAAACGAG 
AATTTCAAGA AAATATACAA GGAGATAAGC AATGGCGGTG AGGCCGAGAT TTTGCTTGAA 
AATCCAGAAA ATCCGTTCAA AGGAGGACTT ATAATAAAAG TCAAGCCAGT TGGCAAGAAA 
TTCGTGAGGT TGGAATCTCT AAGTGGGGGT GAGAAGAGTT TAACGGCCTT AGCATTCATA 
TTTGCCATAC AGCAATACGA TCCATCTCCG TTCTATGTAC TTGATGAAGT TGACATGTTC 
TTAGATGGAA TGAATGCAGA GATGGTTGGC AGGATAATAA AGAGAAATTC TAGGACAGCT 
CAGTTCATAG TCATCTCGCT CAGAAAAGCA ACTTTGAAAT TCGCCGATTA TGTGATTGGC 
GTAACACAGC AGGGTGATGG TTTATCAAGG GTATTCTCAC AGAACATTCC GGGGGTGAGT 
GAGGGTGCAG CATGA 

 

Protein sequence

MPEGDGMYLK AIELENFKSF GRKTRLEFKE GFTAISGPNG SGKSNITDAI LFVLGPKSSK 
KIRAQRLTDL IYNGGKNGRP ADYCRVSLIF DNRDRVLPLD EDEVKLTRYI KRANNELGYN 
SYFYINDEQA RLQDFNSILI HAKIEADGYN FVQQGDVTRI VEMTPVERRT ILDDIAGITK 
FDNEIKKAED KKKITEENMG RIEARLDEIK RNMEKLEKDR MDALKYKELE EELKEIKAKI 
AYLNMKKAEN SIESYNSQLR ELQSAIDSLR EEIEKRRSEE EEIKKKIEEV DAKIRSMGSG 
EIVEMKNKIE ELKIKYAEEK MKKENKEDRI QEYKERIKDW NEQLSQIRQE LKDKEEELRS 
LKERRDAIRK EYEDRAKELE NKERNLGSAN EKFRELQRRA LEIQEELKKL RNEYATKVEE 
ENKVLGNISR IKGDIAAKEE SMKDIEAAIK DAEWRISQFK NENKDVEKKK KALESRYYEL 
RNEETKLSKE LKKKDNEVKE LSIEYEKIKA RMESSQDALS RAVMAVLAAR DRGELRGIYG 
TISELGNVDD KYALAIEVAA GNRMMSIVCE DDESAAKAIE FLKRHKLGRA IFLPLNKMLR 
GRPRGKAILA SRDPHAIGFA MDLIKFDPKF EAAFWYVFGD TVIVDTLDNA RKLMGGVRLV 
TLDGQLIEAS GAMVGGSVER KKKVSMGNLD EIGRKLREAR EERENIEMRL NAIRDELDRL 
IEEIRNIKTQ DNSAQLSVWL EEKKKNQEKL KDIKKQIEEL EKEKRNYEEL RESVRNEIEK 
IKSKIEDMEK EDANLRNRMN NLIPEKLSNE IKELRNMVDS LRSNLQNVEK DIVKVEGEIN 
GLKEKEDEIT KNIENAKEEI KNMEKDIENS EKVMEDIHLE RRKLEEVVRK EEEKIKDLVD 
ERDKLVKNKE RIVKEISKKE GDIKVKDSLK IHIIAKLNEE QGKYEEAKRE YESYGIDVKN 
VESISSLKNR LNDVQAQMMS MGPVNMRSIE EYDEEKERYD KLKEEYKNLE KEKKNLLELV 
RELNGKKKDG LMKVYNAINE NFKKIYKEIS NGGEAEILLE NPENPFKGGL IIKVKPVGKK 
FVRLESLSGG EKSLTALAFI FAIQQYDPSP FYVLDEVDMF LDGMNAEMVG RIIKRNSRTA 
QFIVISLRKA TLKFADYVIG VTQQGDGLSR VFSQNIPGVS EGAA