| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1354 |
|---|
| Symbol | |
|---|
| ID | 8828316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 1298579 |
|---|
| End bp | 1299682 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | Citrate transporter |
|---|
| Protein accession | YP_003483724 |
|---|
| Protein GI | 289597028 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0783517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAC TTAAAAAGAT GAGTAGAGAT TATGTGCTAA TCGTATCTCT AGTTATTTTA
ATTATTATTT CAATTTTTGC CCCTTATTTG GTATCTCAAT ACCCATATTT TGTTGACTGG
AAAACTCTAC TTACTCTTGC TGCACTGTTT TTAATTACTA CAGCTATGAT GGACAGCCAG
TACCTAAAAA TCACTGCTCT GAAATTAATA GAAAAGATAG AAAACGAGAG AAAACTTGCT
TTAGCATTGA TATCTTTCTC ATTTGTACTA TCTATGTTCA TAACTAATGA TGTAACGCTT
CTGCTTCTTG TTCCCCTTAC TCTTTCACTT CAAAGCTATG TTAAGCAGGA CATAAAGAAA
ATGATAATTT TTGAAGCACT CGCAGTAAAT GCTGGCTCTG CTCTTACTCC TATTGGCAAC
CCCCAGAATC TCTATTTGTG GAACCTTTGG GGCGTGGACT TCGGTGCATT TATATTATAT
CTCCTACCCG TTGTTCTTGT ATTGCTTGTT ATTCTTCTTT TCCTTGTCTT CCTTATTTTT
CCATCAAAGC ATCTCCAAAA GTTTGAAATA AAAAATGTTG AAGATGGAGA TAAGAAATTG
GCTTGGTTAT CTCTTATTCT CCTTATTTTT ATGATCATTT TCATGGATTT GAACCTCGAA
TTTTACGCAA TACCTATAAT TTTCATCGTT TACATATTAT ATCGAAGGGA TGTTTATTTA
CATGTTGATT GGCTTCTTCT CTTAATATTT TTCTTGTTTT TTATAGATTT TAATGCAATC
GGGAATCTAC CTGCGGTGAG AAATTTCTTT TTGAATCAGA ACATTTCTGG ATTAAAAGCG
TTTGCTTATG GAGCGCTCAT CTCTCAATTT ATAAGCAATG TACCCGCAGC GATACTTTTG
AGCAATTTTA CGAATGATAT ACAATCTTTA GTTTATGGAG TGAGCGTGGG AGGGAATGGT
ATAATAATAG CATCTCTGGC CAATCTCATT GCTCTGAGAT TTGTTAAGGA TAAAAAATGG
GCAATAGAGT TTCATAAGTA TTCTATTGCA TATTTCATTA TAACATTTAT CATAATGCTC
TTTCTTTTGT ATGTCCTAAT TTAG
|
|---|
| Protein sequence | MNLLKKMSRD YVLIVSLVIL IIISIFAPYL VSQYPYFVDW KTLLTLAALF LITTAMMDSQ
YLKITALKLI EKIENERKLA LALISFSFVL SMFITNDVTL LLLVPLTLSL QSYVKQDIKK
MIIFEALAVN AGSALTPIGN PQNLYLWNLW GVDFGAFILY LLPVVLVLLV ILLFLVFLIF
PSKHLQKFEI KNVEDGDKKL AWLSLILLIF MIIFMDLNLE FYAIPIIFIV YILYRRDVYL
HVDWLLLLIF FLFFIDFNAI GNLPAVRNFF LNQNISGLKA FAYGALISQF ISNVPAAILL
SNFTNDIQSL VYGVSVGGNG IIIASLANLI ALRFVKDKKW AIEFHKYSIA YFIITFIIML
FLLYVLI
|
|---|
| |