Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1318 |
Symbol | |
ID | 8828280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1261774 |
End bp | 1263417 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | type II secretion system protein E |
Protein accession | YP_003483688 |
Protein GI | 289596992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.101894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGG GGATGAAGGT TGACCTGGCA ATAAAGAGAA ATCCACATTT AGGAAGGTAC ATAGAAAAAG TAAGAAAAGA ATTAAACGAG ACACCCGAGT TCTATGAACA ACTATCGAGG GATATGAAAG ACCTTGACTG GGTCAACCTG ATATACCCTG TGGGAGACCC CATATTCATC CACATTTACG GGAGGAGAGG AGATAGAAAA TATCGTGTTA TACAGCCAGA GCTTACCGAT GAGGAGAAAA TAAAATACAA TAAGATCAGG GAATTGATAT TCATAAAGGC AGGATACGAG CCGCCCCATA AGACCAAGGA GGAGTTTGAA AGGCAGTTAG AGAGATTGCT CAAGGATTCT GTTGTTCTTG TGGAAGAGCC GGTGCCCTTT GAAGAGAAGA AGGGTTTTAT GAGCATGTTC AGAAAAATAA AAGTAGCTGT TACGCAAGAG GAATACGATA AAATTGAGTA TTATCTAAAG AGGGATATAA TTGAAAGTGG CCCACTAGAG CCACTGCTTA GGGATCCCTA CATAGAAGAT ATCCATGCCA TAGGAATAGA GCCAGTGCAT CTGATTCACA AAGTATTTGA GACTATGGAG ACAAATGTGC AGTTTTCAAG TTATGATGAA TTGGATTCTT ATTTGAGGGG AATGAGCGAG AGAATGGGCA GACCTGTTAG CACGGGAAGA CCAATAGTAG ATGGGGCTTT GCCAGATGGC TCCAGAATTA ATATTATCTA TGCGGATGAT GTTAGTATTA AGGGTGCATC TTTCACAATA AGAAAATTTG CGGCAGAGCC ATTGAGCGTG ACGCAATTGG TGAAGTGGGG AACATTCTCG GCCGAGATAG CAGCTTATCT ATGGATGGCT ATTGAGTATG GGAAGAGCCT GTTCATCTCA GGAGAAACTG CAAGCGGTAA AACTACAACG CTTAACGCTA TAATTCCGTT TATAAGATAT AATTACAAGG TATTCACCGC GGAGGATACG CCCGAGGTGC ATGTACCTCA CGAGATTTGG CAGAGATTGT TAACCCGTGA AGCTGGTCCC GAAGAATCTC GTGTAGAAAT GTTCGATTTA CTAAAAGCCG CTTTGAGAAG TAGGCCCAAT TACATAATTG TGGGAGAAAT AAGAGGGGCA GAAGGTAATG TGGCTTTCCA AGCAATGCAG ACAGGACACC CGGTTATGGC TACATTTCAC GCATCATCCA TTAAGAGAAT GATACAACGT TTAAGCTCTC CTCCAATTAG CGTGCCTGTT ACATTTATGG ATAATCTAAA CATAGGTGTT TTCCAGCAAG CTGTGTATTT AAAGGGCAGA ACTTTGAGAA GGGTACTCTC CGTGGAAGAG ATATTGGGTT ATTCGAGCGA GCTTGGAGGC GTTATGACAA AGGCAGTTTT TGTATGGGAC CCGCTCAGGG ATGAGCATAT ATTCAGGGGT TTGAATAACT CATACATCCT TGAGGAGAAA ATTGCACCAC TCTTGGGTTA TGATGACCCG CGCAAGATAT ACAACGATTT ATTCCTCAGA GCAAAGATAA TCAAGAAGAT GATCGAGCAC AACATATTCC GATATAGGGA TGTGGTGAAG ATAATAGTGG ATTTTCAGAA ATTTGGAGTG GAGAAACTGC CATTCACGGT GTGA
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Protein sequence | MAMGMKVDLA IKRNPHLGRY IEKVRKELNE TPEFYEQLSR DMKDLDWVNL IYPVGDPIFI HIYGRRGDRK YRVIQPELTD EEKIKYNKIR ELIFIKAGYE PPHKTKEEFE RQLERLLKDS VVLVEEPVPF EEKKGFMSMF RKIKVAVTQE EYDKIEYYLK RDIIESGPLE PLLRDPYIED IHAIGIEPVH LIHKVFETME TNVQFSSYDE LDSYLRGMSE RMGRPVSTGR PIVDGALPDG SRINIIYADD VSIKGASFTI RKFAAEPLSV TQLVKWGTFS AEIAAYLWMA IEYGKSLFIS GETASGKTTT LNAIIPFIRY NYKVFTAEDT PEVHVPHEIW QRLLTREAGP EESRVEMFDL LKAALRSRPN YIIVGEIRGA EGNVAFQAMQ TGHPVMATFH ASSIKRMIQR LSSPPISVPV TFMDNLNIGV FQQAVYLKGR TLRRVLSVEE ILGYSSELGG VMTKAVFVWD PLRDEHIFRG LNNSYILEEK IAPLLGYDDP RKIYNDLFLR AKIIKKMIEH NIFRYRDVVK IIVDFQKFGV EKLPFTV
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