Gene Aboo_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1318 
Symbol 
ID8828280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1261774 
End bp1263417 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content42% 
IMG OID 
Producttype II secretion system protein E 
Protein accessionYP_003483688 
Protein GI289596992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.101894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGG GGATGAAGGT TGACCTGGCA ATAAAGAGAA ATCCACATTT AGGAAGGTAC 
ATAGAAAAAG TAAGAAAAGA ATTAAACGAG ACACCCGAGT TCTATGAACA ACTATCGAGG
GATATGAAAG ACCTTGACTG GGTCAACCTG ATATACCCTG TGGGAGACCC CATATTCATC
CACATTTACG GGAGGAGAGG AGATAGAAAA TATCGTGTTA TACAGCCAGA GCTTACCGAT
GAGGAGAAAA TAAAATACAA TAAGATCAGG GAATTGATAT TCATAAAGGC AGGATACGAG
CCGCCCCATA AGACCAAGGA GGAGTTTGAA AGGCAGTTAG AGAGATTGCT CAAGGATTCT
GTTGTTCTTG TGGAAGAGCC GGTGCCCTTT GAAGAGAAGA AGGGTTTTAT GAGCATGTTC
AGAAAAATAA AAGTAGCTGT TACGCAAGAG GAATACGATA AAATTGAGTA TTATCTAAAG
AGGGATATAA TTGAAAGTGG CCCACTAGAG CCACTGCTTA GGGATCCCTA CATAGAAGAT
ATCCATGCCA TAGGAATAGA GCCAGTGCAT CTGATTCACA AAGTATTTGA GACTATGGAG
ACAAATGTGC AGTTTTCAAG TTATGATGAA TTGGATTCTT ATTTGAGGGG AATGAGCGAG
AGAATGGGCA GACCTGTTAG CACGGGAAGA CCAATAGTAG ATGGGGCTTT GCCAGATGGC
TCCAGAATTA ATATTATCTA TGCGGATGAT GTTAGTATTA AGGGTGCATC TTTCACAATA
AGAAAATTTG CGGCAGAGCC ATTGAGCGTG ACGCAATTGG TGAAGTGGGG AACATTCTCG
GCCGAGATAG CAGCTTATCT ATGGATGGCT ATTGAGTATG GGAAGAGCCT GTTCATCTCA
GGAGAAACTG CAAGCGGTAA AACTACAACG CTTAACGCTA TAATTCCGTT TATAAGATAT
AATTACAAGG TATTCACCGC GGAGGATACG CCCGAGGTGC ATGTACCTCA CGAGATTTGG
CAGAGATTGT TAACCCGTGA AGCTGGTCCC GAAGAATCTC GTGTAGAAAT GTTCGATTTA
CTAAAAGCCG CTTTGAGAAG TAGGCCCAAT TACATAATTG TGGGAGAAAT AAGAGGGGCA
GAAGGTAATG TGGCTTTCCA AGCAATGCAG ACAGGACACC CGGTTATGGC TACATTTCAC
GCATCATCCA TTAAGAGAAT GATACAACGT TTAAGCTCTC CTCCAATTAG CGTGCCTGTT
ACATTTATGG ATAATCTAAA CATAGGTGTT TTCCAGCAAG CTGTGTATTT AAAGGGCAGA
ACTTTGAGAA GGGTACTCTC CGTGGAAGAG ATATTGGGTT ATTCGAGCGA GCTTGGAGGC
GTTATGACAA AGGCAGTTTT TGTATGGGAC CCGCTCAGGG ATGAGCATAT ATTCAGGGGT
TTGAATAACT CATACATCCT TGAGGAGAAA ATTGCACCAC TCTTGGGTTA TGATGACCCG
CGCAAGATAT ACAACGATTT ATTCCTCAGA GCAAAGATAA TCAAGAAGAT GATCGAGCAC
AACATATTCC GATATAGGGA TGTGGTGAAG ATAATAGTGG ATTTTCAGAA ATTTGGAGTG
GAGAAACTGC CATTCACGGT GTGA
 
Protein sequence
MAMGMKVDLA IKRNPHLGRY IEKVRKELNE TPEFYEQLSR DMKDLDWVNL IYPVGDPIFI 
HIYGRRGDRK YRVIQPELTD EEKIKYNKIR ELIFIKAGYE PPHKTKEEFE RQLERLLKDS
VVLVEEPVPF EEKKGFMSMF RKIKVAVTQE EYDKIEYYLK RDIIESGPLE PLLRDPYIED
IHAIGIEPVH LIHKVFETME TNVQFSSYDE LDSYLRGMSE RMGRPVSTGR PIVDGALPDG
SRINIIYADD VSIKGASFTI RKFAAEPLSV TQLVKWGTFS AEIAAYLWMA IEYGKSLFIS
GETASGKTTT LNAIIPFIRY NYKVFTAEDT PEVHVPHEIW QRLLTREAGP EESRVEMFDL
LKAALRSRPN YIIVGEIRGA EGNVAFQAMQ TGHPVMATFH ASSIKRMIQR LSSPPISVPV
TFMDNLNIGV FQQAVYLKGR TLRRVLSVEE ILGYSSELGG VMTKAVFVWD PLRDEHIFRG
LNNSYILEEK IAPLLGYDDP RKIYNDLFLR AKIIKKMIEH NIFRYRDVVK IIVDFQKFGV
EKLPFTV