Gene Aboo_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1311 
Symbol 
ID8828273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand- 
Start bp1254589 
End bp1255317 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content36% 
IMG OID 
ProductPhosphomethylpyrimidine kinase 
Protein accessionYP_003483681 
Protein GI289596985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.275611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTACC TTTTAAGCAT TGCTGGCTTT GATCCCACTT CTGGGGCAGG TGTGATTAGG 
GATATAATAA CCTTTCGCAA GCTTGGATTC TATGGTTTGG GAGTAGCAAC TGCGCTAACC 
TATCAGAATA CAAGGGGATT TGATGGCTTT AAAGTCCTAA GTTCAAATGT TGTGGAGCAA 
GAGCTCAAAG TCATAATGGA AGATTTTCCG ATAAAATTTG TAAAGGTAGG TATGCTTGGC 
ACTTCGGTAG ATTTAATTGT AGAGTTTGCT AGAGAATATG ATTGGTTTTT GATTTTTGAT 
CCCCTTCTCA CAGCGAAAAA TGGAAAGACC ATAAATAAAA TTGAAGATAT TGAGCCGTTG 
CTCAAGATTG CAGAGGTAAT AACTCCAAAT GTTCCTGAGG CGGAGAAACT TGCAGGTATC 
AAAATAAAGA ATGAAAGTGA TGTTATATCA GCTGGTAAAA TTTTAACACA TAAATATGGG 
AAATATGTAA TAATAAAAGG AGGACATTTG AATGGAAGAG ATTATTTATT TGGCGATGAA 
ATAAAATCAT ATGGTATGCC AAAAATCAAT AAAATTGTGC ATGGAACTGG CTGTGCTTAC 
TCTTCCTCTC TTTTATCCTT CATAGCGAAA GGATTGAAAA TAGAAGAGGC ATTTATAGAA 
GTAAGGAAGT TTTTGCAAAG AGAGATAGAG AATGCAATAG ATACGGGGGG ATATTCATTA 
CTTCCATGA
 
Protein sequence
MEYLLSIAGF DPTSGAGVIR DIITFRKLGF YGLGVATALT YQNTRGFDGF KVLSSNVVEQ 
ELKVIMEDFP IKFVKVGMLG TSVDLIVEFA REYDWFLIFD PLLTAKNGKT INKIEDIEPL 
LKIAEVITPN VPEAEKLAGI KIKNESDVIS AGKILTHKYG KYVIIKGGHL NGRDYLFGDE 
IKSYGMPKIN KIVHGTGCAY SSSLLSFIAK GLKIEEAFIE VRKFLQREIE NAIDTGGYSL 
LP