Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1288 |
Symbol | |
ID | 8828250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1235224 |
End bp | 1236180 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | |
Product | Radical SAM domain protein |
Protein accession | YP_003483658 |
Protein GI | 289596962 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.405144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAATTT TGAGGGAAAT TGGTGACGAG TCCATAGCCA AAGTATATAT TGGAAAAACA TACAAAGGGA ATATAATTGA GTTTGTAGAA TCAACACCTA CAGGAGATAT TGGAGAAAAA TGGGTTTTAA TAGTATCTTC GTTAAATGGA TGTCCTGTAG GATGCAAGAT GTGTGATGCA GGATTCTTTT ACAAAGGTAA GTTAGATTTC AAAGAGATTA TGGAACAAAT AGAATACCCA ATAAAGAAAA GATTTGAAGA GAAGCCCAAA ACTAAAAAAT TTAAAATTCA ATTTGCTCGG ATGGGTGAGC CAAGTTTCAA TCCTGCTGTA TTGGATGTAA TAGAAAATTT GGGAGACAAG TATGATAATT TCTTTCCATC ATTATCTACG ATTGCACCAG TGGGTGTAGA TTCTTTTTTT GAGAGGTTGC TTAAAATAAA GAAAGAGAAA TATCCTGAAA AATTTCAGCT TCAATTTTCC ATTCACACTA CAAACACAAA GCAGAGGGAT GAGATAATTC CCATAAGAAA ATGGGATTTT AAGAGAATAT CCGATTATGG TCGTAAATTT TACGATGAAG GGAGCCTAAA AATAACTCTA AACTTCGCAC TTGCCAAGGA AAACGAAGCA GATCCCGAAA TAATAATGAA TTTCTTCTCT CCTGAATATT TCTTAATAAA GATTACACCT GGTAATCCCA CAGTAAGTGC GAAGATTAAT CATATTTCCA ACGATATAGA TCTGAGAAAT GGCTTACCTG TTAAGCACAG AAAATTTGTA GATACACTTA AGAGAATGGG GTATGATGTG ATCATATCAA TAGGTGATAC TAAGGAGAAT CTAATAGGGT CTAATTGTGG AATGTTCATA CTTAGATTTA TAAAAGAGAG GGCAGAATTA AGGGATTCGT ATACATTTGT AAAAGATATA AGCCAATTCC CAGAAATTAT AGAATAA
|
Protein sequence | MEILREIGDE SIAKVYIGKT YKGNIIEFVE STPTGDIGEK WVLIVSSLNG CPVGCKMCDA GFFYKGKLDF KEIMEQIEYP IKKRFEEKPK TKKFKIQFAR MGEPSFNPAV LDVIENLGDK YDNFFPSLST IAPVGVDSFF ERLLKIKKEK YPEKFQLQFS IHTTNTKQRD EIIPIRKWDF KRISDYGRKF YDEGSLKITL NFALAKENEA DPEIIMNFFS PEYFLIKITP GNPTVSAKIN HISNDIDLRN GLPVKHRKFV DTLKRMGYDV IISIGDTKEN LIGSNCGMFI LRFIKERAEL RDSYTFVKDI SQFPEIIE
|
| |