| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1240 |
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| Symbol | |
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| ID | 8828202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | + |
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| Start bp | 1189888 |
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| End bp | 1191120 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_003483610 |
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| Protein GI | 289596914 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACTG AGAAAGATAT AGGCATTTTT TCTTTTTTAT CCTCCACTTC TGGCATAGGT
GGGAAGTTAA GGAAAAATGT TGAAGATTTT TATGTTGAAG AGATTCCATT AGAGCTGGAA
AAGAAGGACA ATGGCAAACA TCTTTGTTTA AAAGTTAAAC TTTTTAACTG GGAAACTAAC
AGATTCGTGA AAATATTGAG CAAAAATTTG GGAATTAGCA GACACCGCAT AAAATTTGCA
GGAAATAAAG ATAAAAGAGG AGTAACCATA CAATATTTTT GCATCCTTAA TTATCCAGGA
AAAATAAACT TAAATCTTAA GGATGTTGAA ATTCTTGATG AATTTAGAAG CAGTAGGGAG
ATAAACATAG GAGATTTGTA TGGAAACAAA TTCGAGATAG TGGTTAGAGA TGCAAAATGT
GATGATAGAG TTGATAAGAT AGAAGAGGAG TTAAATGGTT TTTTCCCAAA TTTCTTTGGT
GTGCAGAGAT TTGGAGCAAG CAGACCTATA ACCCATATTG TTGGAAAATT TATAATTAAA
GGTAGATATG ATGAGGCTGT AAGATACTAC ATAGGCTTTC CCTCTTCCTT TGATGAGGAT
GATGGAAGAA AAATCTTCTT TGAGAATATG GATGCACGGG AAGCCATAAA AAATATAAGT
AAAAATGCAA GTTATGAGAG AGCAATGCTG AATTACCTGA TAAAAAATGA GAGAGATTAT
GTGGGTGCTC TAAAACAGCT ACCCAAGAAT CTCTTGCTAT TATTCGTGCA TGGATATCAG
AGTTATATAT TCAACAAAAT TCTTAGTAAA AGATTAGAAA TAGGAATTGA TGTGCAAGTT
GGAGATATAA TTATGAAGGT AGATAAATTT GGATTGCCTA TGCAAGAATT TGTTAAAGTT
ACAGATTTCA ATATTGAAAA AATTAAGAAT TTAATTAATG CAAAAAAAGC ATATGTTTCC
ACCATACTAT TTGGATATAA TTCATATTTT AGTGAGGAGT CTCAGGGAGA TATCGAAAGA
GAGGTAATTG ATGAGGAAGG GATAAATAAA AAAATGTTTC ACATAAAAGA GATTCCAGAA
TTGAGTTCAA AGGGTAGAAG AAGAAACATA ATTTCTCCTA TTATGGATTA TAATCGAGAC
AATTGTAAGT TTAGGTTTAT CCTTCATCGC GGCTCCTATG CCACATCCCT TATGAGAGAG
TTTATGAAGC AGAATTCTTT GGAATTTTAT TGA
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| Protein sequence | MYTEKDIGIF SFLSSTSGIG GKLRKNVEDF YVEEIPLELE KKDNGKHLCL KVKLFNWETN
RFVKILSKNL GISRHRIKFA GNKDKRGVTI QYFCILNYPG KINLNLKDVE ILDEFRSSRE
INIGDLYGNK FEIVVRDAKC DDRVDKIEEE LNGFFPNFFG VQRFGASRPI THIVGKFIIK
GRYDEAVRYY IGFPSSFDED DGRKIFFENM DAREAIKNIS KNASYERAML NYLIKNERDY
VGALKQLPKN LLLLFVHGYQ SYIFNKILSK RLEIGIDVQV GDIIMKVDKF GLPMQEFVKV
TDFNIEKIKN LINAKKAYVS TILFGYNSYF SEESQGDIER EVIDEEGINK KMFHIKEIPE
LSSKGRRRNI ISPIMDYNRD NCKFRFILHR GSYATSLMRE FMKQNSLEFY
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