Gene Aboo_1175 details

Gene Information

• Locus tag: Aboo_1175
• ID: 8828135
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1122364
• End bp: 1124448
• Gene Length: 2085 bp
• Protein Length: 694 aa
• Translation table: 11
• GC content: 42%
• Product: MCM family protein
• Protein accession: YP_003483546
• Protein GI: 289596850

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.114565
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTTA ATGAAAATGA AATAAGAGAT ATGTGGCACG AGTTTTTTTC ACGCACAGAT 
TATGGAAACA AGTTGAATGA GATTGCGGAC GAGTATCCTG ATACAAGGAG CATTTACATA 
AGATTTGAGG ATATTGAAAA TTACAAACCT CTTTTTGCAG AGGATTTTTT GAAGAACCCT 
GAAATTTACA TAAAGATTGG AGAGGAGGAG ATAAGGAGTT ATATTCACGA TAACGAGAAG 
CATATTCATC TACGCATCCA CCAATTGCCT AGGGACAGGA GAAAGGAGAT ACGAGAGCTC 
AGGAGTGTGC ATGTAGGGCA ATTTCTAAGC ATTGAAGGCA TAATAAGAAG GGCGAGCGAG 
GTGCGTCCTA AACTAAAATT CGGAGCTTTT AGATGTAGTG ACTGTGGAGG AATTACTAAG 
ATTGAGCAAA CGGGAATTAG GTTAATTGAA CCTGTGAAAT GCGCAGTTTG CGGAAAATCT 
AGATTCTCAA ATGATAAAAA ATCAGCTCCC ATAAAATTCA CATTCATACC TGAGAAATCA 
GAGTTTGTAG ACACGCAGAA GGCCGAGATT CAGGACAATC CTGAGAATTT GAGGGGTAGG 
GAGCAGCCCC AGCGTCTCAT GGCTTACTTG GAGGATGATA TTGCAGGAGA GATAGTGCCT 
GGAGATAGAG TGGTTTTAAA TGGAATTTTG AAAGTCAAGG AGCGCAGGAT GTTTGGAAAT 
GTTCGCTCTA CCGAGTTTGA TATTTTCATC GATGTTGTGA GCATAGACAA GGAGAGCAAA 
GAGCTTGAAA GTATTGAAAT AACGGAAGAG GATGAGAGAT TGATAAAGGA GGAGGCTAGA 
AAGGGAGACA TAATTGACAG AATGCGAAGG GCAATAGCCC CTACAATATA TGGAATGGAG 
ATAGAGAAAG AAGCGCTCCT GCTTCAAATG TTTGGAGGGG TAACCAAGAA AATGAAGGAT 
GGAACGAGAA TAAGGGGAGA TATACATATC TTGCTTGTTG GAGATCCTGG TACTGCCAAG 
TCCCAATTAC TGCAATATAT GGCACAACTT GCTCCCAGAG GCATATACAC CTCTGGCAAG 
GGCTCCTCAG CTGCTGGCTT AACTGCAACA GCAGTGCGAG ATGAAACTGG ACGCTGGACC 
TTAGAGGCTG GAGCATTAGT TCTTGCGGAT TTAGGCCTTG CAGCCATTGA CGAGATAGAT 
AAGATGAACG CAACTGATAG GGATAGTATC TATCAAGCCA TGGAGCAGCA GATAATCGCT 
GTAACTAAGG CGGGTATATA TGCAACCTTG ATGGCAAGAT GCTCAATTTT AGGTGCTGCA 
AATCCAAAGT ATGGGAGGTT TGATGTAAGT AGACCCCTCG TAGACCAGAT TGACTTACCC 
ACTCCTCTCC TATCTAGATT TGATGTAATA TTCAAGATTC TTGATAGGCC CAATCCCGAG 
AGAGATAAGG CCCTAGCCAA TCATGTTTTG GAGGCGCATT TGGCAGGTGA GATGCTTCAG 
CTTGAAGAAG AGGATAACAT CGTTGTAAAG CAGTTTGAAA CGGGGATGAC TCCTGAGTTC 
ATAAGGAAGT ATGTGGCTTA TGCAAAGAGA AATATAATTC CAAAGATGAG CGATGAAGCT 
AAGGATCTAA TTTTGAAAAA ATATGTGGAT ACGAGAAAAA TGTACGAGGA GACAAAGGCA 
GTGCCTATAA CTCCCAGGCA GCTTGAAGCT ATGGTTAGGC TGGCAGAGGC ATCTGCAAGG 
GCAAGATTGA GTGATATAGT AACTAAGGAA GATGCTGAGA GGGCAATTAG AATAGTGGAT 
TATTTCTTAA AAGAAACATC TATGGACGAG AGCGGAATAA TTGATTCAGA TGTTTTATAC 
ACAGGGATAA GCTCAAGGCA GAGAAGCGCT ATGGAGAGGA TGGAGCTTAT AATAAAGAGC 
CTAGCTAGTA GCAACAATGG GTTTGCAAGA AAGGAGGACA TAATAGAAGA GGCCAAGAAA 
GAGGGTATAG ATGAGGTGAA AGCAGAGCAG ATATTGGAGA GGATGCACAG GCAGGGAATA 
ATAGCAGAAA CAAAGAGAGG AGTGTACAAA TATGTCCAAG TTTGA 

 

Protein sequence

MEFNENEIRD MWHEFFSRTD YGNKLNEIAD EYPDTRSIYI RFEDIENYKP LFAEDFLKNP 
EIYIKIGEEE IRSYIHDNEK HIHLRIHQLP RDRRKEIREL RSVHVGQFLS IEGIIRRASE 
VRPKLKFGAF RCSDCGGITK IEQTGIRLIE PVKCAVCGKS RFSNDKKSAP IKFTFIPEKS 
EFVDTQKAEI QDNPENLRGR EQPQRLMAYL EDDIAGEIVP GDRVVLNGIL KVKERRMFGN 
VRSTEFDIFI DVVSIDKESK ELESIEITEE DERLIKEEAR KGDIIDRMRR AIAPTIYGME 
IEKEALLLQM FGGVTKKMKD GTRIRGDIHI LLVGDPGTAK SQLLQYMAQL APRGIYTSGK 
GSSAAGLTAT AVRDETGRWT LEAGALVLAD LGLAAIDEID KMNATDRDSI YQAMEQQIIA 
VTKAGIYATL MARCSILGAA NPKYGRFDVS RPLVDQIDLP TPLLSRFDVI FKILDRPNPE 
RDKALANHVL EAHLAGEMLQ LEEEDNIVVK QFETGMTPEF IRKYVAYAKR NIIPKMSDEA 
KDLILKKYVD TRKMYEETKA VPITPRQLEA MVRLAEASAR ARLSDIVTKE DAERAIRIVD 
YFLKETSMDE SGIIDSDVLY TGISSRQRSA MERMELIIKS LASSNNGFAR KEDIIEEAKK 
EGIDEVKAEQ ILERMHRQGI IAETKRGVYK YVQV