Gene Aboo_1134 details

Gene Information

• Locus tag: Aboo_1134
• ID: 8828094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1087492
• End bp: 1088157
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 39%
• Product: TraB determinant protein
• Protein accession: YP_003483505
• Protein GI: 289596809

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0000459949
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAATCC TGGTAGGCGT GGCCCATGTA ATAGATCTGA AGGTACATAT AGAGAGGCTT 
ATATTGGAGG AAAATCCTGA TATAGTGGCA GTAGAATTGG ATTACGGTAG ATATGTTGCC 
CTAACCACGA AACAGCAGGG AGAGATGCCG TATTTTTATC GCAAGATGGC CGAGATGCAG 
AAGAATCTTG CAGATATGCT TGGAGGTGAG GTGGGCTCTG AGATGGTGAC TGCGGTTAGA 
ACTGCACAAA TTATGAATAA GCAAGTGGCG TTCATAGATA TGGATTCTCA GCAAATAATC 
AAGAGCGTAA AGAAGAATAT GAGTTTGTGG GAGAAAGTTA AAATGTACGG TTCTCTGATA 
TTTGCACCCT TAGTTGGTAA GAAAATGGGA AAGAAAGAGG TGGAGAGTAT AATTGACCAG 
GAAGATAAAT ACATAAAAGA AATGAAGAAA AAGTATCCCG GATTATCAAA GGCACTTTTT 
GATGATAGGG AAGAATTTAT GGCAAATAAC CTGAAACGCT TAGATGGTGA AGATATAAAG 
ATTCTGGCTT TTGTTGGTGA TGGGCACCTT GAGGGTTTGA AAAAAAGGTT ACCGGAGGCA 
AGAACAATAA GATTGAAAGA TATTTTGGGA GAGAGTAGAA GTTTCTCTTA CAAAATTTAC 
ACTTAA 

 

Protein sequence

MIILVGVAHV IDLKVHIERL ILEENPDIVA VELDYGRYVA LTTKQQGEMP YFYRKMAEMQ 
KNLADMLGGE VGSEMVTAVR TAQIMNKQVA FIDMDSQQII KSVKKNMSLW EKVKMYGSLI 
FAPLVGKKMG KKEVESIIDQ EDKYIKEMKK KYPGLSKALF DDREEFMANN LKRLDGEDIK 
ILAFVGDGHL EGLKKRLPEA RTIRLKDILG ESRSFSYKIY T