Gene Aboo_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1113 
Symbol 
ID8828073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1066933 
End bp1068522 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content44% 
IMG OID 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003483484 
Protein GI289596788 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00736856 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGG GAATACTGGT TGGCTTTATT ATATACTTGT TCATCCTGGC CTTTATCGGC 
TGGTGGTCAA ACAAGTATAC AAAGAACGAG AGCCAGTACT ACATTGGAGG AAGACATGTT
CATATCTTAG CAGCATCTCT GAGCGATAAA GCAAGTGATT TCTCAGGTTG GCTTATGCTG
GGTTATCCAG GTAGTGCTTT CAAAGCTGGT GTTGGTGCAA TTTGGGCCGC CATAGGATGT
CTAGGTGGTA CCCTGCTCAA CTGGACAATG ATGGCTGTCA GATTGAGAAT ATATGCAGGA
AAGCTCAAGG CAATAACTAT ACCTGATTTC TTAGAGGCCA GAGTTAAAGA CCATACAAAG
CTAATACGCT TTATCTCGGG TCTTATAATT TTGGTATTCA TGACCGCCTA TGTGGCAGCC
CAGTTTGCAG CAGGAGGTAA GACCTTTGCA GAGGCATTCA GTGTTAGTTA TGAATGGGGC
GCAGTTATAA CATTTGTAAT TCTGGTGGCC TATGTGGTCG TTGGCGGATT CTTCGCAGTG
GTATGGACCG ATGTCTTTCA GGCACTGCTT ATGCTCACAG TGCTTATAGT TGTTCCATTC
TTGATTGTAG GCGAAGTTGG GGGATTTGCT AATGCAATAA ATCTTATCGG GCAGGCAGAT
CCCACAAAGC TATCTCCGTT TGGAGGTGCA GTTGGTTTAG CTGCGGTGGT ATTTGCCATA
GGTTATGCAT CTTGGGTTGT AGGTTACATA GGACAGCCTC ACATCCAGAC CAGGTTCATG
GCTGCCAAGC ACCCTAAAGA ACTCAGAAGA CCTGGAATTT TCATAAGTAT AATATGGACT
ATATTGGTTC TGTGGGGTGC ATTCTTTGGT GGCTTCTTGG GAATTGCCCT AGTTCAAAAA
GGCTCTCTAA CCGTGAGCGA TCCAGAGCAA ATAATACCTG CATTGATTGT GCACTTCACA
CCACCACTAG TTGCTGGTAT ACTTATCTCT GGTATAATAT CTGCAGTGAT GAGTACCGCT
GATTCACAGC TTCTTGTGGC AGCATCCGCT GTTGGTAGAG ATTACATACA CAAGATATTC
AATTATGAAC CCACTCAGAA GCAGATGGTT AATATAGGGA GACTGGTAGT TTTCATCTTA
GGCCTCATAG CACTATGGTT TGCACTTAGA CCCAATCCAC TTGTGTACGG AATGGTTGCA
ACTGCCTGGG GTGGATTAGG TGTTGGCTTT GGACCGCCAT TAATACTATC ACTATGGTGG
AAGAGGATAA CAAAGGAAGG AATAATAGTT GGTATGCTCT ATGGACTTAT ATCTGAGGTT
TATATGGAGA GCACTATTGG CTGGGCATTT ACTAGTGGGC CATTGAAGGG AGTTCCAATA
TTCTTTGTAA ACTTCTTTAT AACTCTGTTT GTGATAATCA TAGTGAGCTT GGTAACAAAG
CCACCAGAGG ATGTTGTGAA GAGACATCTA AGCCTTTACA AGAAAGTAGC TGTGGAGAAT
ACTGCAGAGA AGACCGTTGC GGAGACAAGA GCAAAGAGCC AGGTTGAGCA TGTGGCAGAG
CATGTGCTTC TCAATGCTCT AATTCCTTGA
 
Protein sequence
MSWGILVGFI IYLFILAFIG WWSNKYTKNE SQYYIGGRHV HILAASLSDK ASDFSGWLML 
GYPGSAFKAG VGAIWAAIGC LGGTLLNWTM MAVRLRIYAG KLKAITIPDF LEARVKDHTK
LIRFISGLII LVFMTAYVAA QFAAGGKTFA EAFSVSYEWG AVITFVILVA YVVVGGFFAV
VWTDVFQALL MLTVLIVVPF LIVGEVGGFA NAINLIGQAD PTKLSPFGGA VGLAAVVFAI
GYASWVVGYI GQPHIQTRFM AAKHPKELRR PGIFISIIWT ILVLWGAFFG GFLGIALVQK
GSLTVSDPEQ IIPALIVHFT PPLVAGILIS GIISAVMSTA DSQLLVAASA VGRDYIHKIF
NYEPTQKQMV NIGRLVVFIL GLIALWFALR PNPLVYGMVA TAWGGLGVGF GPPLILSLWW
KRITKEGIIV GMLYGLISEV YMESTIGWAF TSGPLKGVPI FFVNFFITLF VIIIVSLVTK
PPEDVVKRHL SLYKKVAVEN TAEKTVAETR AKSQVEHVAE HVLLNALIP