Gene Aboo_1086 details

Gene Information

• Locus tag: Aboo_1086
• ID: 8828044
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1042138
• End bp: 1042848
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 38%
• Product: NUDIX hydrolase
• Protein accession: YP_003483457
• Protein GI: 289596761

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.702437
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGTAA AATACCGTTT CTGGTTTGAA TCTCCAGCAG GCTATGTTTT TGGTCCAGGA 
AGTTATCAGA TTCTCAAAGA GATTGAAAAA ACAGGAAGTT TGAGAAAAGC AGCCAGCAAT 
CTTGGGATGT CTTATAGACA TGCTTGGGGA TTGATAAAAG AAATCGAGGA AAATTTAGGA 
GTAAAAATAA TAACCTCTCA TCGTGGTGGA AGAGAAGGAG GAGAGAGCAC GATCACAGAA 
GAGGGTATCA AACTGCTTAG AGAATATGAA AAATATGAAA AAGTGTTTGA TTATGTTATC 
AAGCATCCAT ACATCAAACC TTCAATAACT GTAGATGGCA TATTGGTGGA AGATGAGAAG 
ATTCTGCTGG TAAAGAGGGG CAGAGAACCA TTTAAGGGTA TGTATGCACT TCCCGGAGGA 
TTTGTAGAGT ATGGGGAGAG AACTGAAGAT GCAATAGTAA GAGAGATGGA AGAGGAAACG 
GGATTAAAAA CGGAAATTAT AGGGCTAGTT GGAGTTTATT CTGACCCAAA AAGAGATCCT 
AGGGACCATA CTATAACCGT GGTGTATGAG CTAAGAAGAT TGGGGGGTAA ATTAAAGGGT 
GGCGATGATG CAACCTATGC TACTATGTTC CCCTTAAATG CTCTTCCTGA GTTGGCATTT 
GACCATGCAA AAATTATTGA GGATTTTAAA AATATGAAAT TTAATAGATA A 

 

Protein sequence

MIVKYRFWFE SPAGYVFGPG SYQILKEIEK TGSLRKAASN LGMSYRHAWG LIKEIEENLG 
VKIITSHRGG REGGESTITE EGIKLLREYE KYEKVFDYVI KHPYIKPSIT VDGILVEDEK 
ILLVKRGREP FKGMYALPGG FVEYGERTED AIVREMEEET GLKTEIIGLV GVYSDPKRDP 
RDHTITVVYE LRRLGGKLKG GDDATYATMF PLNALPELAF DHAKIIEDFK NMKFNR