Gene Aboo_0932 details

Gene Information

• Locus tag: Aboo_0932
• ID: 8827885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 889438
• End bp: 890010
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 40%
• Product: TrkA-C domain protein
• Protein accession: YP_003483303
• Protein GI: 289596607

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAATG TCAAAGATTT GCTTGTAGAA ATCAAGGAAA AATCGGAGCT TATCGTTGAT 
TTGGCCTATT CAGCCATAAT TTTAGATAGT GAGGACCTGG CAAAAGAAGT GGAAAAATTG 
GAGAAAGAGA TAAGCGAGTT AACCTACAAG ATAAGAATAG TGAGCATGCT TGCTGCAAAT 
ACCCCTGATG AGGCAGAACA ACTTGCAGGA ATATTGCAGA TGGCTGACTC ATCCAACAAT 
CTGGCAAATG CAGCTGCGGA TATTGCATAT CTCCTCGATT TAGATATAAC TGCAAGGCCT 
TTTCTACCGA GCTTGTTTAT GAAGGCTGAT GAAAAGATAC ATGTGGTCAA GGTTTATCCC 
AATTCAAGCA TAGTAAACAG AACCTTAGGA GAATTAAATA TTGAAGTAGA GAGTGGAGTA 
AGAATAATAG CAATAAAACG GGGACGCAAC TGGATTTACG ACCCAGAAGA TCATGTGAGG 
ATAAAAGCGG ATGATTTGCT CATAATAAGG GGCACAGAGG ATGGCTATGA ATTCTTAGAC 
AGGGTAGCAA GGGGTGAGGA AAGTTGGGAT TAG 

 

Protein sequence

MENVKDLLVE IKEKSELIVD LAYSAIILDS EDLAKEVEKL EKEISELTYK IRIVSMLAAN 
TPDEAEQLAG ILQMADSSNN LANAAADIAY LLDLDITARP FLPSLFMKAD EKIHVVKVYP 
NSSIVNRTLG ELNIEVESGV RIIAIKRGRN WIYDPEDHVR IKADDLLIIR GTEDGYEFLD 
RVARGEESWD