| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0930 |
|---|
| Symbol | |
|---|
| ID | 8827883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 887614 |
|---|
| End bp | 888846 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | RNA-metabolising metallo-beta-lactamase |
|---|
| Protein accession | YP_003483301 |
|---|
| Protein GI | 289596605 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACG CAAAATTCTT AGGCGGTGCG GAGGAGGTTG GAAGCCTCGG ATTGTATATG
CAAATAGGTG AGTTGCGGCT TCTTTTTGAT TATGGACTAA CTCCTTCAAA GCCACCCGCA
TATCCCATGC ATGCCCCTCC TGTGGATTCT TTATTCATAA CCCATGTGCA TTTAGACCAT
TCTGGAATGG TTCCGAGAAT TGCTATGGAA TATGAGGCAA ACATATATGC AACACCTCCA
ACAAATTCTG TGCTACCCTT AATGTTAAAC GATACGATCA AAGTTGCAAA CATTGAAGGT
TTTCCTATAC CATACACGAA GGAGGAGGTA GAAAATACCG TTGATGGGCT CATAGATGTA
GATTACGGAA AAACAATAGA GCTTGGCTCA TTGGATATTA TACCTCACAG TGCGGGTCAC
ATACCCGGAA GCGCAATGTA TGAGATTAAA GATGATAGAA CGATACTGTT CACGGGAGAT
ATTCAAACTG TTAACACACA TCTCGTGTGG GGCACAAAGC CTGTAAAAAC GGATGTGCTC
ATAATGGAAA GTACCTACGC TGGAAGAGAG CACCCCCCAA GAGATAAAGT TGAGAAAAAC
TTCTTGGCAA AAATTGAAGA AATCGTGGAT AATGGAGGTA AAGCCATAGT GCCGGCATTC
GCAGTAGGCC GTACCCAAGA GATTATGCTA ATACTTGCAA AAACCGACTT TGAAGTGTGG
GTTGATGGGA TGGGTAGATT CGTTACAAAT CTATTCCTGC AAAATCCACA GTATCTAAGA
TCTGCAAAGA AATTGAAAAA AGCGAGAAAC AAGATGCATA TAGTACGAAG GAGAAGCGAT
AGGAGAAAAG CTCTGAAGGG AGAAGTAATA GTGGCAACAG GAGGAATGCT TGAAGGAGGC
CCTGTGTTAC ATTACATAAA TCATCTAAAG AATGATCCAA AAAGCGGGAT ACTGCTCACT
GGCTATCAAG TGGAGGGAAC TAATGGAAGG TTGCTAATGG ACGAAGGCAT ACTTGAATTG
TATGGAGTAA AGGAAAAAAT TGATATGGAT ATAGATTTCT TTGATTTCTC CGCGCATGCT
GGACACTCCG AGCTAATTGA ATTTGCAGAA AAATGCTCTC CAGAGAGAAT AATATTAATG
CACGGGGACA ATAGGGAAGC CCTTGCAAAA GATTTGAGAA ATAGGGGATT TGAAGTTATT
ATGCCAAAAA ACGGTGAAGA TTTCGTTATT TAG
|
|---|
| Protein sequence | MINAKFLGGA EEVGSLGLYM QIGELRLLFD YGLTPSKPPA YPMHAPPVDS LFITHVHLDH
SGMVPRIAME YEANIYATPP TNSVLPLMLN DTIKVANIEG FPIPYTKEEV ENTVDGLIDV
DYGKTIELGS LDIIPHSAGH IPGSAMYEIK DDRTILFTGD IQTVNTHLVW GTKPVKTDVL
IMESTYAGRE HPPRDKVEKN FLAKIEEIVD NGGKAIVPAF AVGRTQEIML ILAKTDFEVW
VDGMGRFVTN LFLQNPQYLR SAKKLKKARN KMHIVRRRSD RRKALKGEVI VATGGMLEGG
PVLHYINHLK NDPKSGILLT GYQVEGTNGR LLMDEGILEL YGVKEKIDMD IDFFDFSAHA
GHSELIEFAE KCSPERIILM HGDNREALAK DLRNRGFEVI MPKNGEDFVI
|
|---|
| |