| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0822 |
|---|
| Symbol | |
|---|
| ID | 8827772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 787728 |
|---|
| End bp | 788732 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003483193 |
|---|
| Protein GI | 289596497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAT TTCAAAGATT CATAAGAGAG TTGCGAAAAA GAGCTAAGAG AGAGGATAAA
AGAAATTTAA TCTCTGTTTG GAGTGAGAAA GACAGGCTTC AAGGGAGGAT TGTGGATTCT
TTCGTTATCA TTCTCCGCAC CAAGGGTTGC AGATGGGCCT ATCATTCAGG ATGCTCCATG
TGCGGTTACT TCAACGATAC TAATCCAAGG ATGAGTGATG AAGATTTACT CAATCAAATC
AACGAGGCAT TTGAAAAATA TAAGAACGAA GAAGTTGTAA AAGTATTCAC CTCCGGCTCA
TTCTTGGATG ATTGGGAAGT CCCACCCAAG ATTCAAAATG CATTGTACGA TAAGTTCTCC
TCAGCAAAGA GAATAATTGT GGAGAGTCGA CCAGAGTATG TAACAAGGGA GAAAGCAAAG
AAAATTGCAG AAAGGGGAAA TATAATGGTT GCTTTAGGAC TTGAGAGCGC CAATAATGAA
ACTTTGAGAA AGAGGATAAA TAAGGGATTT AAAGTGGAAG ATTATGTTAG GGCTGCTGAA
ATTTTGAATG AATTTGATAT CCCTGTGAAA ACCTACATTC TCCTAAAACC ACCTTTTATG
AGCGAAAGAC AGGCAATTGA AGAAGCGATA TACTCCGTGG AATTCGCCTC ACAGTACTCT
GAAATTGTAT CTGTAAACCC TATGAATATC CAGAATTATA CACTTGTGGA ATATCTATGG
CGTAGAGGAG AGTATAGAGC ACCATGGCTA TGGAGCGTGG TTGAAGTACT AAAGAGAACT
GCTAATTTGG ATGCTGATGT GGTATCATTT CCAACCGCAG GAGGTAAAAC CCGTGGAGCA
CACAATTGCG GTAAATGCGA TGAAAAAGTC CTTAAAGCTA TAGAAAACTT CTCCCTGACT
CAAAATTTGG AATCACTAGA GAATTTAAAC TGCTCCTGCA AGGAAAGATG GAGAAAAATT
GTGAATTATG AAGATTACTT ATGGGATTAC TCTATAAATC ATTAG
|
|---|
| Protein sequence | MDEFQRFIRE LRKRAKREDK RNLISVWSEK DRLQGRIVDS FVIILRTKGC RWAYHSGCSM
CGYFNDTNPR MSDEDLLNQI NEAFEKYKNE EVVKVFTSGS FLDDWEVPPK IQNALYDKFS
SAKRIIVESR PEYVTREKAK KIAERGNIMV ALGLESANNE TLRKRINKGF KVEDYVRAAE
ILNEFDIPVK TYILLKPPFM SERQAIEEAI YSVEFASQYS EIVSVNPMNI QNYTLVEYLW
RRGEYRAPWL WSVVEVLKRT ANLDADVVSF PTAGGKTRGA HNCGKCDEKV LKAIENFSLT
QNLESLENLN CSCKERWRKI VNYEDYLWDY SINH
|
|---|
| |