Gene Aboo_0799 details

Gene Information

• Locus tag: Aboo_0799
• ID: 8827749
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 764661
• End bp: 765389
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 41%
• Product: Sigma 54 interacting domain protein
• Protein accession: YP_003483170
• Protein GI: 289596474

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGGTAA AATTCGGTGT GGCAGGACTC GACAAGATGC TTGAGGGAGG GCTAATTAAG 
GGTAATACCT ACCTTCTTAT GGGTGATACG GGTACTGGTA AAACTATATT ATCTGCAAGA 
TTCTTACTTG AAGGACTAAA TAATGGGGAG AATTGTCTTT ACATCTCTGT GGATAAGCAC 
CCATCTTTAG TTCTCCAGAG AATTATGCTT GGATTTGGCT GGAATCTTAG CAGATTGCGT 
GTTATGGATG CTGTTCCAGT TGAGTTGCTC TATTCCACAT CTCCATCTAT AAAAGATATA 
ACTGCAAAAG GGGAGATTAG AGCCGCTTAT GAGGATTCGA GAAAATCAAA GGGAGGAGGC 
CTTAGTGTTG AGGCCCTGAT CATAAAGGTA AACCAAGAAC TTAAAAAGGG TAAGATAGAT 
AGAGTAGTGT TGGACTCTCT TACCGTGTTC AAGAATTTTG CCGTTGAAGA GAGTCGATCT 
TTGCTAAGTA TTCATAGGTT ATTCACATTT TTCCAGAATA TTGGAGCAAC GACCATAATA 
ACCGCATCTG ATAAGATGAA TTTGTATGCT GAGATTCTCC TTAGTTCTGG AGTGATAAAA 
CTGGAGAAGA ATCCAAGCAA TAGCGGGGAA GAGAGGTACA TCCGGATTTT GAAAATGCGT 
GGCTCTGGGT ATGATCCAAG GGCCAAGAGG ATGTATATAA CTGAAGACGG GGTATTTGTT 
TTAAGATGA 

 

Protein sequence

MRVKFGVAGL DKMLEGGLIK GNTYLLMGDT GTGKTILSAR FLLEGLNNGE NCLYISVDKH 
PSLVLQRIML GFGWNLSRLR VMDAVPVELL YSTSPSIKDI TAKGEIRAAY EDSRKSKGGG 
LSVEALIIKV NQELKKGKID RVVLDSLTVF KNFAVEESRS LLSIHRLFTF FQNIGATTII 
TASDKMNLYA EILLSSGVIK LEKNPSNSGE ERYIRILKMR GSGYDPRAKR MYITEDGVFV 
LR