Gene Aboo_0742 details

Gene Information

• Locus tag: Aboo_0742
• ID: 8827689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 705204
• End bp: 707195
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 42%
• Product: DNA topoisomerase VI, B subunit
• Protein accession: YP_003483113
• Protein GI: 289596417

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00831988
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGAAGT ATTTAAATGA GTATGCCTTA TTAGAAACGG GATGCGCTAT GGGTATTGCA 
CACAGGATGG CAAAGAAGCA GAGGGAGATT AGCGTAGCAG AATTCTTTGA AAAGAACAAG 
CAGATTTTGG GTTTTGATTC CTTAACTAAA GCTTTAGTTG TGAGTGTAAA AGAGGCTGTT 
GATAATTCCT TAGATGCATG CGAAGAGGCT GAAATTTTGC CAGATATTTA TGTTGAGATT 
CAAAATGTCA GTAAGGATGA GTATAAGATA ATTGTGGAGG ATAATGGTCC CGGCATAATT 
CGCCGCAATA TTCCCCTTGT TTTTGGTAAG CTGCTCTATG GTTCAAGGTT CCATGCTATA 
AGACAGAGCA GGGGGCAGCA GGGCATAGGC ATAAGTGCCG TAGTGCTGTA TGGGCAGCTC 
ACCACAGGCA AGCCCACAAG AGTAATATCC AAGATAAAAG AAGAAGAGGT GGCGTATGAG 
GTTTTGCTCA CAATTGATAC GAAGAAAAAT GAGCCAAGGG TGATAAAGGA AATTCCAAAA 
ATATGGGATA GAGAGCAAGG AACGAGAATT GAAATAAGTA TTCGAGCCAG ATATGTGAGG 
GGTAAGCAGA GTGTTTATGA ATATCTGCAA CAAACGGCTA TTGTAAACCC ACATGCTCAA 
ATAACATTTG TAGAGCCGGA TGGTAAGAAA ACGATATTTA AAAGGGCCAC AGATAAGCTT 
CCCCCACCAA CAAGGGAGAT AAAACCGCAC CCTCATGGTA TAGAACTGGG TGAACTTTTG 
AATATGGCAA GAAATACAAA GACCTATCGA CTCACATCGT TTCTCACAAA TGAATTCTCA 
AGGGTTAGCC CCAAGATTAC TGAGGAGATT TGCAAAAAAG CATATTTATA TGGGGATATG 
CGCCCTCAAG AACTGAGTAT TGAAGAGGCA AAGAGATTGC TTGAAGCTTT CAAAAAAGTG 
AAACTAATGG CTCCACCAAC GGATTGCCTC TCTCCCATAG GAGAAACTTT AATAAAGAAA 
GGCCTGAAAA ATGTGCTTGG CTCTCTGCGT CCAAGTTTCT ATGCCCAGCC TGTAACACGT 
ACTCCAAAAG TTTACAGTGG TAACCCATTT GTGGTTGAGG TAGGATTGGT TTATGGGGGT 
GAATTGCCAA AAGACCAACC TGTCAGAATT TTAAGATTCG CCAATCGAGT GCCGCTACTT 
TATCAGCAGG GAGCATGCGT AACAACAAAG GCAATTAGCA GTGTGGACTG GCGCCGTTAT 
GGTTTAGAGC AGCGTGGAGG ACAAGGTATA CCAGTTGGTC CTGCCATAAT CCTTGTGCAT 
GTGGCCTCTA CCCGCGTACC ATTCACCTCA GAGGCAAAGG AGGCAATAGC GGATGTACCT 
GAGATTAGAG AGGAGATAGA GCTTGCCTTA AAATCATTGG GTAGACAGCT CAGACTTTAC 
AATGTAAAGA AGGAGCGCAA AAGTAAGATG ACTGAGAAGT TTTTCCTTGT AAACAAGCTT 
CTTCCCGAGA TAGCAAGAAA GAGTGCAGAG ATTGTGGAAA AGCCCATACC TCCATTGGAG 
CCAGTTATAT CGAAGATTAT GAATGTAGTA TGGATTGATG AGAGTGTAGA AAAAGAAGAG 
GATAAAATAA AGGTTAATGT GCGTGTTGCA AATTTCACAT CTAAGCATCA AAAATTTGTG 
CTTTACGGGG ACTACCCATT GGGTAATTTA ATTGATACAG ATGGTATTGC AGAGGAAGAT 
TATGTTAAAT GGGATGTTGA TATTGAGCCC GTATCTTACA GGCATTTTTA TTTCACTCTT 
AAAGATGCTG ATAAGTATGG AGAGACAAAT TATTATGTGG AAGGTATAAG TCCTAATATC 
GTTATAGGTG CTGAGCCCTT GCCAGGAGAT TGGAACATAA AGCTCAGCGA GATTGAAGAG 
ATAGTAGAGG ATGAGGATAT GGAAAATGGT GAAGATGTGG AAGAGGAGTT TGAGGTGATT 
GATGATGAGT AG 

 

Protein sequence

MEKYLNEYAL LETGCAMGIA HRMAKKQREI SVAEFFEKNK QILGFDSLTK ALVVSVKEAV 
DNSLDACEEA EILPDIYVEI QNVSKDEYKI IVEDNGPGII RRNIPLVFGK LLYGSRFHAI 
RQSRGQQGIG ISAVVLYGQL TTGKPTRVIS KIKEEEVAYE VLLTIDTKKN EPRVIKEIPK 
IWDREQGTRI EISIRARYVR GKQSVYEYLQ QTAIVNPHAQ ITFVEPDGKK TIFKRATDKL 
PPPTREIKPH PHGIELGELL NMARNTKTYR LTSFLTNEFS RVSPKITEEI CKKAYLYGDM 
RPQELSIEEA KRLLEAFKKV KLMAPPTDCL SPIGETLIKK GLKNVLGSLR PSFYAQPVTR 
TPKVYSGNPF VVEVGLVYGG ELPKDQPVRI LRFANRVPLL YQQGACVTTK AISSVDWRRY 
GLEQRGGQGI PVGPAIILVH VASTRVPFTS EAKEAIADVP EIREEIELAL KSLGRQLRLY 
NVKKERKSKM TEKFFLVNKL LPEIARKSAE IVEKPIPPLE PVISKIMNVV WIDESVEKEE 
DKIKVNVRVA NFTSKHQKFV LYGDYPLGNL IDTDGIAEED YVKWDVDIEP VSYRHFYFTL 
KDADKYGETN YYVEGISPNI VIGAEPLPGD WNIKLSEIEE IVEDEDMENG EDVEEEFEVI 
DDE