Gene Aboo_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0716 
Symbol 
ID8827662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp679519 
End bp680319 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content39% 
IMG OID 
Productputative circadian clock protein, KaiC 
Protein accessionYP_003483089 
Protein GI289596393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0711817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC AACTTAGAAA ATTAGATATA GGGTTAAGAA TTTACTATCC TGTAATGATA 
ATCACGAGAG AGAGGTGCAA AACGGGAATC GAGGGATTGG ATAATATATT GAATGGGGGA
ATTCCTAGGG GTAATACTAT TCTAATAACT GGCTCTTGTG GTACGGGAAA AACCACTCTG
AGCTTAGAAT TCTTAACCAG AGGGGCTCTT ATGGGTGAGA GATCAATGTA CATATCCGTG
ACAGAAGTTC CTGAGAAATT GATAGAGAAT ATGAGTACCT ACGAATTTTT TGATAAAAAT
TTAGTTAAGG AGAAAAAGCT AATATTCGTG GATTTGCAGG AGATTTATGT GAAGCTGGGG
CTTGAAAAAT TAGAATTTAC CCTAGAAGAT GTAAACATAC TGGTAGAGCA GATAATAAAG
ATGGTGAAAG AACTCGGGAT AAAAAGATTG GTTATAGATA GCATAACTTC CATATGCTAT
AGATTAACTT CAAGAGAGCA GATTAGAGAG TTCATCCTTC AACTTGGAAA GGCCTTATCA
GATATGGGCT GTACAACCTT GTTGGTTTCT GAACTCTTAC CCTCTGCAGC CGGCTATTCT
CAATACGGGG TGGAAGAGGC AATTGCTGAC GGAATCATAT TGATGGGTAA TTTAGAGAGG
AGAGGAGATT TGCTGCGCAC AATTCAAGTA ATAAAAATGA GAGGTACCAC CCACTCCAGG
GCAAAATATG TGTTGGACTT GACCCCCATT GGAATACTAT TGGCCCCATT GCTCAAGGGC
GGAAGTGTGG AGGTGCGATA A
 
Protein sequence
MKYQLRKLDI GLRIYYPVMI ITRERCKTGI EGLDNILNGG IPRGNTILIT GSCGTGKTTL 
SLEFLTRGAL MGERSMYISV TEVPEKLIEN MSTYEFFDKN LVKEKKLIFV DLQEIYVKLG
LEKLEFTLED VNILVEQIIK MVKELGIKRL VIDSITSICY RLTSREQIRE FILQLGKALS
DMGCTTLLVS ELLPSAAGYS QYGVEEAIAD GIILMGNLER RGDLLRTIQV IKMRGTTHSR
AKYVLDLTPI GILLAPLLKG GSVEVR