| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0691 |
|---|
| Symbol | |
|---|
| ID | 8827637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 655325 |
|---|
| End bp | 655756 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_003483064 |
|---|
| Protein GI | 289596368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATTTA TCATAAATAT GAGAGATTTG AAAGAACATA AAACTTATGA ATCTCTGAGG
CGTGTTATGA TTCACTGGGG CTTTGGAGAG TTAGAAGCTG CAATATACGC ACTATTGGTG
ATGAAACAAA AACCCATGAC TGCTAAGGAA ATCGCAAATG AAATCGGATA TGCCTATAGT
TCCGTGGTAA ATGCCTTAAA TCAGCTAAGG AGACATGAGA TGATTGAGAG GAAGAAGGGT
GTAAAATGCT ACACCTATTC TGCTGTGATA GATTTTATCA GAATAATAAA GAACGAGAGG
TTGAAAGTGA AGAACTTTTT GACAGAGGCA AAGATGGCAT TAGAAGGAAA AGATGAGGAA
TATGCCGAGC TTTTGAGACA TCTGGAGGAG GGCATAGAGT ATTTAGGAAA ATTGGAAAAA
GAGGTGAGAT AA
|
|---|
| Protein sequence | MIFIINMRDL KEHKTYESLR RVMIHWGFGE LEAAIYALLV MKQKPMTAKE IANEIGYAYS
SVVNALNQLR RHEMIERKKG VKCYTYSAVI DFIRIIKNER LKVKNFLTEA KMALEGKDEE
YAELLRHLEE GIEYLGKLEK EVR
|
|---|
| |