Gene Aboo_0555 details

Gene Information

• Locus tag: Aboo_0555
• ID: 8827500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 537054
• End bp: 537743
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 42%
• Product: putative circadian clock protein, KaiC
• Protein accession: YP_003482928
• Protein GI: 289596232

Plasmid Coverage information

• Num covering plasmid clones: 78
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATGA GAATAAAAAC TGGAATTGAG GGATTGGACG ATATGCTCAA CGGTGGCATT 
CCCAAAGGGC ATACCGTGGC GGTTATAGGT GCATTTGGCA CTGGAAAAAC CACATTTGCT 
ATGCAATTCA TCTGGGAAGG CCTAATTAAT GGAGAAAGGT GCATATTTTT GAGCTTGGAA 
GAAGACGAGG ATAGTGTTGT AGAAAGTGCA AGTAAATTTG GGTGGGATTA TTCCAAGTAC 
TTGGGCTCTC AGCTCCAGCT TTTAAAACTT GATCCTGAGG ATGCAAAGAG TAGCGTTGAG 
AGATTGGAGA GCGATATACC CGAGCTCATA AAAGAGTTTG AGGCAACGAG GATTGCCGTG 
GATTCTATAA GTTTGATAAC GATGATGTAC GATAGCATTG ATGAGAAGAG AAAGGTAGTT 
TTCAAGCTTG CAAAGAGCAT AAAGGAGAGT GGTGCAACTG CGGTTTTTAC AGCAGAAGTG 
GACCCAAAAA ATCCCAAGGT TAGCAGGGAT GGAATTGTGG AGTATGTTGT TGACGGGGTA 
ATCCTTCTAT CTTTTCTTGA AGAGAACAAT GTTCTAAAGC TCACAATTAG AGTTTTGAAG 
ATGAGAAGAA CTCAGCATTC GAGAGAGGTA AAATTGTACG AGATAGGAGA GGGAGGAATA 
AATGTTCTTG CCCAAGCGGA TGTATTTTGA 

 

Protein sequence

MNMRIKTGIE GLDDMLNGGI PKGHTVAVIG AFGTGKTTFA MQFIWEGLIN GERCIFLSLE 
EDEDSVVESA SKFGWDYSKY LGSQLQLLKL DPEDAKSSVE RLESDIPELI KEFEATRIAV 
DSISLITMMY DSIDEKRKVV FKLAKSIKES GATAVFTAEV DPKNPKVSRD GIVEYVVDGV 
ILLSFLEENN VLKLTIRVLK MRRTQHSREV KLYEIGEGGI NVLAQADVF