Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_0554 |
Symbol | |
ID | 8827499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | + |
Start bp | 536236 |
End bp | 537054 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | HTR-like protein |
Protein accession | YP_003482927 |
Protein GI | 289596231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 72 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAC CTACATCTGT GGCTGCATTT GACGAAATTG TTAAAGGCGG GGTACCTGCC GGCTCGGTTG TAATTCTTGC TGGAGAACCG GGGTCTGGCA ATGTTGAATT TGCATACACT TCAGCTGCAA AATTATCCAT AGCGAGAAAA TACCAGGAAA GGAGAAAATT TATGGTTATA GAGGCGGAGG ATATTTACAT TCCTGAGGGC ACTCTGTACA TATCCTTTTC CAAGAGCGAG GATGAGATAT TTCGTGCAAT AGATTTGACA TTTAACGAAG ACCTCGGTGA AGCATTCAGA GATTCTCTAA AAATTAAAGA TTTATCCGTA GAGTATTTTC GTAACAGCAT AGTGCCTAGG AGATGGATTA CGGAGAGCAC GGGGGAATTT TTGAAGAGGA AAGGAGACAT ACTGAAAGAG TTCGTGAATG TGCTTGACTC GTACTCGAAT GGCAGAATAG TTATTGTGGA CTCTTTAACT GATTTAGTCA CCTCCACTCG CATAAATTTT GAAAATTTAA TTGATGTGAT AAAAGGGTTG AGGAGGGCAG CTAAGAAATG GAACACGGTA ATTTATCTCC TTTTAACTCT AGGCGTAGTG GACAAGATGA AGGAAAACTT GCTTTTTGAT TCAGTTGACG GGGTATTTGT ATTCGAGTGG CATGGTTCTG AAAGTTACTC AAAGAGGTAT CGCTATATGT ATGTGCTAAA ATTTGTGGGG CTTATGGCTC ATCTTGAGGA GGAGAGGATT GCTAGGTTTA ATACCACTTT AAACAGACGC AGTGGGTTTG TGGTGGTGAA TACTGAAAAG ATAGGGTGA
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Protein sequence | MRIPTSVAAF DEIVKGGVPA GSVVILAGEP GSGNVEFAYT SAAKLSIARK YQERRKFMVI EAEDIYIPEG TLYISFSKSE DEIFRAIDLT FNEDLGEAFR DSLKIKDLSV EYFRNSIVPR RWITESTGEF LKRKGDILKE FVNVLDSYSN GRIVIVDSLT DLVTSTRINF ENLIDVIKGL RRAAKKWNTV IYLLLTLGVV DKMKENLLFD SVDGVFVFEW HGSESYSKRY RYMYVLKFVG LMAHLEEERI ARFNTTLNRR SGFVVVNTEK IG
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