| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0554 |
|---|
| Symbol | |
|---|
| ID | 8827499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 536236 |
|---|
| End bp | 537054 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | |
|---|
| Product | HTR-like protein |
|---|
| Protein accession | YP_003482927 |
|---|
| Protein GI | 289596231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 72 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAC CTACATCTGT GGCTGCATTT GACGAAATTG TTAAAGGCGG GGTACCTGCC
GGCTCGGTTG TAATTCTTGC TGGAGAACCG GGGTCTGGCA ATGTTGAATT TGCATACACT
TCAGCTGCAA AATTATCCAT AGCGAGAAAA TACCAGGAAA GGAGAAAATT TATGGTTATA
GAGGCGGAGG ATATTTACAT TCCTGAGGGC ACTCTGTACA TATCCTTTTC CAAGAGCGAG
GATGAGATAT TTCGTGCAAT AGATTTGACA TTTAACGAAG ACCTCGGTGA AGCATTCAGA
GATTCTCTAA AAATTAAAGA TTTATCCGTA GAGTATTTTC GTAACAGCAT AGTGCCTAGG
AGATGGATTA CGGAGAGCAC GGGGGAATTT TTGAAGAGGA AAGGAGACAT ACTGAAAGAG
TTCGTGAATG TGCTTGACTC GTACTCGAAT GGCAGAATAG TTATTGTGGA CTCTTTAACT
GATTTAGTCA CCTCCACTCG CATAAATTTT GAAAATTTAA TTGATGTGAT AAAAGGGTTG
AGGAGGGCAG CTAAGAAATG GAACACGGTA ATTTATCTCC TTTTAACTCT AGGCGTAGTG
GACAAGATGA AGGAAAACTT GCTTTTTGAT TCAGTTGACG GGGTATTTGT ATTCGAGTGG
CATGGTTCTG AAAGTTACTC AAAGAGGTAT CGCTATATGT ATGTGCTAAA ATTTGTGGGG
CTTATGGCTC ATCTTGAGGA GGAGAGGATT GCTAGGTTTA ATACCACTTT AAACAGACGC
AGTGGGTTTG TGGTGGTGAA TACTGAAAAG ATAGGGTGA
|
|---|
| Protein sequence | MRIPTSVAAF DEIVKGGVPA GSVVILAGEP GSGNVEFAYT SAAKLSIARK YQERRKFMVI
EAEDIYIPEG TLYISFSKSE DEIFRAIDLT FNEDLGEAFR DSLKIKDLSV EYFRNSIVPR
RWITESTGEF LKRKGDILKE FVNVLDSYSN GRIVIVDSLT DLVTSTRINF ENLIDVIKGL
RRAAKKWNTV IYLLLTLGVV DKMKENLLFD SVDGVFVFEW HGSESYSKRY RYMYVLKFVG
LMAHLEEERI ARFNTTLNRR SGFVVVNTEK IG
|
|---|
| |