Gene Aboo_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0476 
Symbol 
ID8827421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp466219 
End bp467145 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content40% 
IMG OID 
ProductWyosine base formation domain protein 
Protein accessionYP_003482849 
Protein GI289596153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCAG AGATAGAGAG GATACTCCGC AAGCAGGGCT ATGCGATTGT AGGGAAGCAT 
AGTGCTGTAA AGCTCTGCCA TTGGCTTAGA GAGAGTTTGA TTCATGAGCG TCCTTGCTAT
AAACAAACTT TCTATGGAAT AAAAAGCCAT CGTTGTCTCC AAATGAGTCC AGCGGTGAAT
AACTGCACGC ATAACTGCCT TTTTTGCTGG CGTTTTCAGG GATTCAGTGA GGTTTATATG
AAAGAAGTTG ATGAGCCAGA ATTTATTGTG GAGGAGAGTA TTAGACAGCA GAGAAGATTA
ATCACGGGAT ATAAAGGAGA CCCACGGGTA TCTTTAGAGA AATGGAAGGA GGCCATGGAG
CCAAGGCATG TGGCTATATC CCTCACGGGA GAGCCTACGC TTTACCCAAG ATTGGGAGAA
TTGATAGAGG AGTATCATAA AAGGGGATTC ACCACATTCT TGGTTACAAA TGGTACCATG
CCTGAAATTT TAGAAAATTT AGACCCTTTG CCCACACAGT TATATGTTAC CCTGGCTGCA
CCCAACGAAG AAATATACAA AAAATTGATG GTTCCGCTTA TAAAGAATGG ATGGGATAGA
TTAAAAAGAA CTTTAGAACT TTTACCATCT TTAGATACGA GAAAAGTTAT TAGGCACACT
CTTGTGAAAG GTTGGAATAT GAAGAATGTT GAGGAGTATG CAAAGCTTGA CACTCTTGCA
GAACCGCACT TTATAGAACC AAAAGCCTAT GTTTTTGTTG GATATTCTAG GGAAAGATTA
ACAATTGAAA ATATGCCCTC TGCGGAAGAA GTTGAGAATT TTGCTCGTAA ATTATCTGAG
CTCACAGAAT ATAAGTACGA GGATGAAAGG AAAGATAGCA GAGTAGTGCT CCTCATGAAA
GAAAATGTCC AGAGGTTCAT AGAGTAA
 
Protein sequence
MDPEIERILR KQGYAIVGKH SAVKLCHWLR ESLIHERPCY KQTFYGIKSH RCLQMSPAVN 
NCTHNCLFCW RFQGFSEVYM KEVDEPEFIV EESIRQQRRL ITGYKGDPRV SLEKWKEAME
PRHVAISLTG EPTLYPRLGE LIEEYHKRGF TTFLVTNGTM PEILENLDPL PTQLYVTLAA
PNEEIYKKLM VPLIKNGWDR LKRTLELLPS LDTRKVIRHT LVKGWNMKNV EEYAKLDTLA
EPHFIEPKAY VFVGYSRERL TIENMPSAEE VENFARKLSE LTEYKYEDER KDSRVVLLMK
ENVQRFIE