Gene Aboo_0413 details

Gene Information

• Locus tag: Aboo_0413
• ID: 8827356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 412084
• End bp: 412788
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 41%
• Product: ribonuclease PH
• Protein accession: YP_003482786
• Protein GI: 289596090

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAATA GAAAACCCGA TGAAATAAGA AATGTGGAAA TCATTCCAAA TTACCAGAAA 
AAACCCTATG GCTCCGCATT AATAAAACAA GGAGATACCG TAGTTCTATG CTCCGCACAG 
GTTATAGAAA ATGTTCCAGA TTGGCTAAAA GAGCAAAATT CTGGATGGTT AACTGCCGAG 
TACTCTATGC TTCCCGGTTC TTCAGAAACA AGGATATTCC GCGATAGAGG CCATGTAAAT 
GGTAGGAGCA AGGAAATTGA GAGAATAATA GGTAGATGTC TCCGGGCCGC TGTGGACCTG 
AAAAAATTAG GCCCTAGAAC GATATGGATC GATTGTGATG TTATCCAAGC CGATGGGGGA 
ACGAGAACTG CGAGCATAAC TGCAGGGTTT GTAGCACTCT CTTTAGCAAT AAGAAGATTG 
ATGAAGGAAG GAAAATTAGG CGAAAACCCA ATAAAATACA AAGTTGCGGC TATAAGTGCA 
GGAATTGTTA ATGGTGAACC ACTTTTGGAT TTAGCCTATG AAGAAGATTC CCAAGCGGAT 
GTGGACATAA ATATAGCTAT GAACGAGGAA GGAAAGTATA TTGAGATACA GGGCACATCC 
GAGAAAGAGC CGCTGAGCAG AGAGAATCTA AATATATTGC TTGATCTTGC AGAAAAGGGA 
ATAAAAGAAT TATTTAAAAA GCAAGAGGAG GCCCTTAATG TGTAG 

 

Protein sequence

MRNRKPDEIR NVEIIPNYQK KPYGSALIKQ GDTVVLCSAQ VIENVPDWLK EQNSGWLTAE 
YSMLPGSSET RIFRDRGHVN GRSKEIERII GRCLRAAVDL KKLGPRTIWI DCDVIQADGG 
TRTASITAGF VALSLAIRRL MKEGKLGENP IKYKVAAISA GIVNGEPLLD LAYEEDSQAD 
VDINIAMNEE GKYIEIQGTS EKEPLSRENL NILLDLAEKG IKELFKKQEE ALNV