Gene Aboo_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0397 
Symbol 
ID8827339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp393391 
End bp394587 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content42% 
IMG OID 
ProductAdenylosuccinate synthase 
Protein accessionYP_003482770 
Protein GI289596074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTG CAGTTATTGG CTTGCAGTTT GGCGATGAGG GGAAGGGGAA AATTGTGGAT 
TACCTCGCTG AAGATTTTGA TGTAATCGCT AGGTATTCGG GAGGCAGTAA TGCTGGGCAT
AGCGTGTTGT ATAATGGCAA AAAATTCAAA TTGCACCTCA TACCAAGTGG GGTTTTACGA
GGAAAGATAG GAGTCCTTGG AAACGGGATG GCAATAGATT TTTCAGTTTT AGATGAGGAA
TTTAAATCTT TAAGAGGGGA AGGATTAGAG CCAAAGATAA AGATAAGCAG CAGGGCGCAT
GTGGTAACTT CGTTTCACAA AATTATGGAT GAAAAGGAAG ATGAGATTAT AGGGATAGGG
ACTACTAGGC GAGGAATAGG TCCCACCTAT GAGACAAAGG TTAAGAGAGT GGGTATAAGA
GTTGGGGATG TTTTTGATGA TGCTATTTTG CTAAAAAGAT TGAAGCTCGC AACAAAATTA
TGGAGTATTT ATGATGAAAA AGAGGTGGAG AAAGAGGCAA GGGCAATAAG GGAGCAGGTG
CGAAAATTCA AGGAATTTAT TGTAGATACT GAGATATGGT TAAATGAAGT GATAAGAGCG
GGAAAGAAAG TGCTTTTTGA GGGTTCTCAG GCTGCTCTTT TGGATGTGGA TTTTGGCACA
TATCCATTTG TGACATCCTC TAACACCATT TCGGGAGGTA TGCTTTCTGG GCTTGGAATA
TCTCCCAGAT CCATCGATAA AATTGTAGGT GTTATGAAGC CCTATATGAC AAGGGTTGGT
GCAGGTCCAT TTCCAACTGA AATTTTCGGG AAAATGGCCG AAGAGTTGAG GGATAGGGGT
AAAGAGTATG GGGCTACAAC AGGAAGGCCG CGGAGAATTG GCTGGTTGGA TTTACCCCTC
CTGCGTTATG CAACTCTGGT TGGGGGTGTG GATGAAATTG CATTAACCAA GGTTGATATT
TTGCAGGGTA TGGAAGAAAT ACCGGTGGCT TTTGAGTATA ACTGCAGTGG GAAGAGAAAG
TATCCTCCTA TGCATATTGA GAAATGCGAA CCAATTTATA TGAAACTTCC TGGATGGAAA
AGCATAGAAG ATGAAAATTT ATGGAATTAT ATGAAAATGA TAGAAAGGGA AACGGGAGCT
AAAGTACGGA TGATATCCTA TGGAGCGAGC AGGGAAGAAA CCATGCTCAT AGATTGA
 
Protein sequence
MNIAVIGLQF GDEGKGKIVD YLAEDFDVIA RYSGGSNAGH SVLYNGKKFK LHLIPSGVLR 
GKIGVLGNGM AIDFSVLDEE FKSLRGEGLE PKIKISSRAH VVTSFHKIMD EKEDEIIGIG
TTRRGIGPTY ETKVKRVGIR VGDVFDDAIL LKRLKLATKL WSIYDEKEVE KEARAIREQV
RKFKEFIVDT EIWLNEVIRA GKKVLFEGSQ AALLDVDFGT YPFVTSSNTI SGGMLSGLGI
SPRSIDKIVG VMKPYMTRVG AGPFPTEIFG KMAEELRDRG KEYGATTGRP RRIGWLDLPL
LRYATLVGGV DEIALTKVDI LQGMEEIPVA FEYNCSGKRK YPPMHIEKCE PIYMKLPGWK
SIEDENLWNY MKMIERETGA KVRMISYGAS REETMLID