| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0253 |
|---|
| Symbol | |
|---|
| ID | 8827195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 259054 |
|---|
| End bp | 260361 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_003482627 |
|---|
| Protein GI | 289595931 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00000123579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAAAA CTGTTAGTAC AATCGCTAAA AACACAGGTA TTCTTTTTTT ATCTAGAATT
ATCAGTAAGT TGTTTGGTTT TTTTTATTTG ATATATACTG TGAGATATTT AGGTCCTGCA
AATTATGGTA TTCTAGCATT TGCCTTGGCT TTAAATGGGA TATTTAGAGT TTTGATTAAT
TTTGGAATAG ATCCTTTATA TGTCAGAGAA ATAGCAAGAA ATAAAAAATT AGCTCCTAAA
TATTTAGCTA ATGGCATAGT ATTGAAAACT TTACTAGGAG CACTAACATT TTTGATTATT
GCATTAATAG TTAATTTCTT GGAATATCCT TATACTACCG TTATGGTTGT ATATATTATA
ACGATAACAT GGATTGTTGG AGGTATTATA AATTTATTTG TAGATTTATG TAACGCATTT
GAGAAAATGG AGTTTGTAGG TATGGGGCAA ATCCTTCAAA GTATATTGTT CCTGGTATTT
ACTATTATAG CAATAGTATT AAGATTAGAT GTTATACATT TTGCATTTAT TTATATTATT
GTATATTTAA TTATACTAGG ATATTATGGA ACGATAATTA CTCTTAAGTT TATAAGAATC
ACTCTAGAGG CAGATTGGAG TTTATGGAAG TACATAATAA AAGATGCGTG GCCATTTGCA
CTGACTTCCT TTTTTGTTGG TGTGTATTAT TATACAGATT CAATTATGTT ATCTTTCATT
AAGAGTAATT TTGAGGTAGG AATATATAAT GCAGCTTATA AATTATCAAT TACAGCTTCA
TTTATCCCTT TTGCATATCT TACTTCTATA TACCCCCGAA TATCTATGGA ATATAAACGC
AATCATAACA AATTTGAGAA AATGTCACTA TATTCAGTAT ATATTATGGG ATTTTTTGGA
ATGATTATAA TGATTTTAGG ATACTTATTA GCACAACCCT TAATAATAAT CATATATGGC
TATAAATATA TAAATTCTAT ACCCATTTTT CAGATTCTTA TTATATCTAT AGGTATCGGT
TTCCTCACGC AAACTTTCGG TTATTTATTA AATGCATCGA ACAATCAAAA GTTAGAGATG
TATATAATGC TTGTTGGTAT ACTTTTAAAT ATAGCATTAA ATTATGCATT GATCTCTATT
AAAGGAGCTG TGGGTGCAGC GTTTGCTACC TTAATTACGA GAATTTTTCT GTTGATAGTA
AGAGGATCCA TTTTAAAGAA AAAGAAAATA ATAACATCAT ATAAAATAAG TAGAAAAGAT
TTACGGCTAA TTAAACATAT ACTAACGTTA GATTGGAGGA GGTTATGA
|
|---|
| Protein sequence | MGKTVSTIAK NTGILFLSRI ISKLFGFFYL IYTVRYLGPA NYGILAFALA LNGIFRVLIN
FGIDPLYVRE IARNKKLAPK YLANGIVLKT LLGALTFLII ALIVNFLEYP YTTVMVVYII
TITWIVGGII NLFVDLCNAF EKMEFVGMGQ ILQSILFLVF TIIAIVLRLD VIHFAFIYII
VYLIILGYYG TIITLKFIRI TLEADWSLWK YIIKDAWPFA LTSFFVGVYY YTDSIMLSFI
KSNFEVGIYN AAYKLSITAS FIPFAYLTSI YPRISMEYKR NHNKFEKMSL YSVYIMGFFG
MIIMILGYLL AQPLIIIIYG YKYINSIPIF QILIISIGIG FLTQTFGYLL NASNNQKLEM
YIMLVGILLN IALNYALISI KGAVGAAFAT LITRIFLLIV RGSILKKKKI ITSYKISRKD
LRLIKHILTL DWRRL
|
|---|
| |