| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0239 |
|---|
| Symbol | |
|---|
| ID | 8827181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 241988 |
|---|
| End bp | 242611 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | LmbE family protein |
|---|
| Protein accession | YP_003482613 |
|---|
| Protein GI | 289595917 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.817384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAA TACTAGTTAT ATCTCCTCAT GCCGATGATG CGGAGCTTGG AGCTGGATCA
TCCATCTCTA GATTTATAAG GGAAGGACAT GAAGTTACTG TGTATCTTTT AATAACCAAG
GAGAAGTTTC CAGAAAACTT TCCGATTAGG GATAGAATTA ACGAGTTTAA AGCTTCGATG
AAGGTTTTAG GTGTAAGAGA TTACAGAGTT GATGAGTATC CTGTGAGAGA AATTTACAAG
TATAGGCAAG AGATACTTGA TAGGCTTATA AAAATAAGAG ATGAGATTAA CCCTGATATT
GTGCTTATAC CATCCTTGAG TGATATACAT CAAGATCATC AGGTTGCGGC TATAGAAGGA
TATAGAGCAT TTAACAGAAG AAGCAACATT TTGAGCTATG AACTGCCTTG GAATACCACT
AAATTTATGC CAAATTATTA TATCAAGGTT AAAGAAGGGG ATGTAAAAAA TAAGATTGAA
GCTTTAGATA GATACGAGAG CCAGAAGTTG CTTAATAGAA GATATTTCAA TCCTGAGTTT
TTGAGAGCAC AACTCATCTT TAGAGGTGTG CAGTGCAATA GTAACTATGC AGAAGCTTTT
GAAGTTTTGC ACTGGCAGTA TTGA
|
|---|
| Protein sequence | MMRILVISPH ADDAELGAGS SISRFIREGH EVTVYLLITK EKFPENFPIR DRINEFKASM
KVLGVRDYRV DEYPVREIYK YRQEILDRLI KIRDEINPDI VLIPSLSDIH QDHQVAAIEG
YRAFNRRSNI LSYELPWNTT KFMPNYYIKV KEGDVKNKIE ALDRYESQKL LNRRYFNPEF
LRAQLIFRGV QCNSNYAEAF EVLHWQY
|
|---|
| |