| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0184 |
|---|
| Symbol | |
|---|
| ID | 8827122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 191457 |
|---|
| End bp | 192155 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | Ribosome maturation protein SBDS-like protein |
|---|
| Protein accession | YP_003482558 |
|---|
| Protein GI | 289595862 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000286758 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAGGC TTGAGGATGC TGTAATAGCA AGGTACGAGC ACTCAGGGCA TAGATTTGAG
ATTCTTGTAG ATCCTAACAT TATAGATGAT GTAAAATCTG GAAAGGTGGA GAATGTAATA
GATTATATGG TCATAGATGA GATTTTCAAA GATGCACATA AGGGTGATAG AGCCAGTGAG
GAGTTAATAA AAGAAGTTTT TGGAACTACA GATGTAAACG AGGTAGCTAA GGAGATAATC
AAGAAGGGAC AGGTTCAACT CACTACAGAG CAGCGCCGCA AGATGTTGGA AGAGAAGAAA
AGGAGAATAA TTGCAGAGAT TGCCAGGAAC GCTATAAATC CTCAAACAGG GGCCCCACAT
CCTCCCCAGA GAATAGAACT GGCTATGGAA GAGGCGAAAG TGCATATAGA TCCATTTAAA
TCTGTTGAAG AGCAAGTTCC CGTTGTGCTC AAAGCTTTGC GTCCTATAAT TCCAATAAGA
TTTGAAAAGG TTAAGATTGC AATCAAGGTA AGTGGAGATA TGTATGGCAA GATTTATGGG
GAGTTGAGCA AGAGTGGCAC TATACTTCAG GAAGAATGGC AGAAGGATGG CTCTTGGATT
GGTGTTGTTG AAATTCCTGC TGGTATGCAG GGTGAGTTTT TAGATATGTT GAATAAGAAA
ACACATGGTA ATATTCAAAC AAAGATTTTA AGGAGGTAA
|
|---|
| Protein sequence | MVRLEDAVIA RYEHSGHRFE ILVDPNIIDD VKSGKVENVI DYMVIDEIFK DAHKGDRASE
ELIKEVFGTT DVNEVAKEII KKGQVQLTTE QRRKMLEEKK RRIIAEIARN AINPQTGAPH
PPQRIELAME EAKVHIDPFK SVEEQVPVVL KALRPIIPIR FEKVKIAIKV SGDMYGKIYG
ELSKSGTILQ EEWQKDGSWI GVVEIPAGMQ GEFLDMLNKK THGNIQTKIL RR
|
|---|
| |