Gene Aboo_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0171 
Symbol 
ID8827109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp183057 
End bp184082 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content43% 
IMG OID 
Productpeptidase M20 
Protein accessionYP_003482545 
Protein GI289595849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.19921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATCA AGATTGAAGA GCTTGTTGAG CTTTCAAAAA TAAGGAGCGA GACAGGATAC 
GAGGCGAAAA TTCTTGGATA CATAGAGGAG AAATTGGAAG CTCTGGGTGT GAATTACGAG
CGTATGCCCG TGGATGAAGA GAGGTACAAT ATAATTGTCA ATCCAGAGGA AAAATTTATG
ATTAACGCCC ATGTGGATAC CGTTGGTGAT TACTTCCCCC CAGAGATTGA GGGCGATATT
CTCTGGGGTA GAGGAGTGAT GGATGATAAG GCGGGTGTGC TTATAATGCT CAAGCTCATA
GAAGAATTTA AAGATTCTCT CCCCGTTAGC TATGTTTTCT TCGTTGATGA GGAAGAGGAA
GGAAAGGGCT CTAAGAAGTA CGCTGAGAAG TATGCGCACG ATTTTGCGAT AACCATGGAG
CCCACATCTC TAAGAGTATG CACGGCCGAG GCGGGAAGTC TAGAGCTGGA ATTTGAGTTT
TGGGGAAAGG CCATGCATGG CTCCTGTGCA GAAGAGAAGG AAAATGCGAT ATGGCAAGGT
ATAAAGTTTA TAAGTGAGAT GAAAAAATTA AAGTTTCTGA AGGCGGAGCA TAAATTGCTT
GGGAAGCCAG CGATAAATGT CGAAATGTTT GATGGAGGGG ATTATATTCT TGCGGTCCCA
GAGAGTGCCA AAGCGTTGGT TGATTTTGTT TATCTGCCTG GTCAAACTGC TGTTGAGATA
ATTGACGAGG TGAATAGAAT TGGAAGAAAG TACAATGTGA ATCATATGAT TTACGATTTA
TCACCTCCCT TTGAAATATC CTCTCGGAAA CGAAGGGTTA AAGAATTTTT GAAGTATGCC
GAACTCGGAG GATTCCGCAG CTGGAGTGAT GCTCAAAGTT TGGTGGATAA GGGTACTCCT
ACCGTGGTAT TTGGACCTGG GGAATTGAGA TATGCGCACA CGAAGGACGA GCATGTGAAT
ATAAAAGATG TGAATAAAGC GTACGATATT TTGAAAAAAG TATTGAAAGA TTGGAGCTCG
GCGTAA
 
Protein sequence
MDIKIEELVE LSKIRSETGY EAKILGYIEE KLEALGVNYE RMPVDEERYN IIVNPEEKFM 
INAHVDTVGD YFPPEIEGDI LWGRGVMDDK AGVLIMLKLI EEFKDSLPVS YVFFVDEEEE
GKGSKKYAEK YAHDFAITME PTSLRVCTAE AGSLELEFEF WGKAMHGSCA EEKENAIWQG
IKFISEMKKL KFLKAEHKLL GKPAINVEMF DGGDYILAVP ESAKALVDFV YLPGQTAVEI
IDEVNRIGRK YNVNHMIYDL SPPFEISSRK RRVKEFLKYA ELGGFRSWSD AQSLVDKGTP
TVVFGPGELR YAHTKDEHVN IKDVNKAYDI LKKVLKDWSS A