| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_3834 |
|---|
| Symbol | |
|---|
| ID | 8826704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013923 |
|---|
| Strand | + |
|---|
| Start bp | 220555 |
|---|
| End bp | 222342 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | urocanate hydratase |
|---|
| Protein accession | YP_003481937 |
|---|
| Protein GI | 289583527 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CCACACAGGA GCCGACGAAC GACGGCGAGG CCGACGACGC TGCACACGAT
ATCGGCACGC CTTCCGAACA GTGGCAGGAG TACCAGGGCG CACCCACAGG CACGGAGATC
GAGTGCGAAG GGTGGCGACA GGAAGCCGCA CTCCGCATGC TCAACAACAA CCTCGACCCC
GAGGTCGGCG AGAAACCCGA AGAGCTCGTC GTCTACGGCG GCACCGGCCG AGCAGCCCGA
AGCTGGGACG CCTACGACGC CATCCTCGAG TCGCTCCGAA CGCTCGAAGA CGACGAGACG
CTCCTCGTCC AGTCCGGCAA ACCGGTCGGA CGGTTCACCA CGCACGAACG CGCACCGCGC
GTTCTCATCG CGAACTCGAA CCTCGTCGGC AAGTGGGACG ACTGGGACCA CTTCCACGAA
CTCGAGTCGA AGGGACTGAT CATGTACGGC CAGATGACCG CCGGCTCGTG GGCGTACATC
GGCACCCAGG GAATCATTCA AGGAACCTTC GAGACGCTCG CGGAGGCCGC CAGACAGCAC
TTCCCCGACC GTGATGGGCT TCGCGGGACG ATCACCGTCA CCGCCGGCCT CGGTGGAATG
GGCGGTGCCC AGCCGCTCGC TGTGACGATG AACAACGGCG TCTGTATCGC GGCTGAAGTC
GACGAGGACC GGATCGACCG CCGCCTCGAG ACGGACTACT GCATGGAGAA GACCGACGAC
ATCGACGAGG CACTCGAGTT AGCCCAGGCT GCAGCAGCCG AGGACGAGCC GCTGTCGATC
GCGTTGCACA TGAACGCGGC AACGATGTTC GACGAACTGC GTGAGCGGGA GTTCGTACCG
GATATCGTGA CGGACCAGAC GAGTGCGCAC GACGAGCTTG AGGGATATTA CCCAGCTGGC
TATTCTGTTA CTGAATCAGA GAGGTTGCGC GAGAAAGACC CCGAAGCGTA CGTCGAGGAG
AGCCTCGATA CGATGGAACG ACACGTCGAG GGAATTCTCG CGATGCAAGC GCGCGGTGCG
GTCGCGTTCG AGTACGGGAA CAACATCCGC GGACAGGTAG AAGAGCACCG AAATATGGAC
GACGCGTTCG ACTTCCCCGG CTTCGTTCCG GCGTACATCC GCCCGCTGTT CTGTCGCGGC
AAGGGCCCGT TCCGCTGGGT CGCTCTCTCC GGCGACGAAT CGGATATCCA CCGCACCGAC
GAGGCCGTCA AAGAGTTGTT CCCGGAGAAG GAGCATCTCC ACCGCTGGAT CGACCTCGCA
CAGGAGCAGG TCTCGTTCCA GGGACTGCCG AGCAGGGTCT GCTGGCTTGG GTATCAGTCC
GCTGATGATC CTGGTGACCT AACAGAACGA GCACAGTTTG CACTTCGGAT CAACGACCTC
GTCGCCGAGG GTGAAATCTC CGCGCCGGTC GTCGTCACGC GCGACCATCT CGACGCGGGC
AGCGTCGCGA GTCCGAACCG GGAGACAGAG GCCATGCGAG ACGGCTCCGA CGCCGTCGCG
GACTGGCCGA TTCTCAACGC CTTGCTCAAC GCGTCTGCGG GCGCTGACAT CGTCAGCGTC
CACGACGGCG GCGGCGTCGG CATCGGCAAC TCGCTGCACG CCAACAATCA CGTCGTCCTC
GACGGCTCGT CGCTCGCCGC CGAGAAGGCC CGCCGCGTGT TCACGACGGA CCCCGGCATG
GGCGTCGTCC GCCACGCCGA CGCCGGCTAC GAGGAGGCAC TCGAGGAGGC GGCCGAATCG
AACGTGCATG TGCCGATGGC AGACGCAAAA ACACAGGAGG ACAAGTAA
|
|---|
| Protein sequence | MTTPTQEPTN DGEADDAAHD IGTPSEQWQE YQGAPTGTEI ECEGWRQEAA LRMLNNNLDP
EVGEKPEELV VYGGTGRAAR SWDAYDAILE SLRTLEDDET LLVQSGKPVG RFTTHERAPR
VLIANSNLVG KWDDWDHFHE LESKGLIMYG QMTAGSWAYI GTQGIIQGTF ETLAEAARQH
FPDRDGLRGT ITVTAGLGGM GGAQPLAVTM NNGVCIAAEV DEDRIDRRLE TDYCMEKTDD
IDEALELAQA AAAEDEPLSI ALHMNAATMF DELREREFVP DIVTDQTSAH DELEGYYPAG
YSVTESERLR EKDPEAYVEE SLDTMERHVE GILAMQARGA VAFEYGNNIR GQVEEHRNMD
DAFDFPGFVP AYIRPLFCRG KGPFRWVALS GDESDIHRTD EAVKELFPEK EHLHRWIDLA
QEQVSFQGLP SRVCWLGYQS ADDPGDLTER AQFALRINDL VAEGEISAPV VVTRDHLDAG
SVASPNRETE AMRDGSDAVA DWPILNALLN ASAGADIVSV HDGGGVGIGN SLHANNHVVL
DGSSLAAEKA RRVFTTDPGM GVVRHADAGY EEALEEAAES NVHVPMADAK TQEDK
|
|---|
| |