| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_3278 |
|---|
| Symbol | |
|---|
| ID | 8826142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 3402319 |
|---|
| End bp | 3403653 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_003481390 |
|---|
| Protein GI | 289582924 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.703793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA ACCGAATGAC ACGACGACGG CTGCTCGCGG GGTCGAGTGT TGCTGCGGCC
GCTGGACTCG CGGGCTGTAC CGACCGCCTG GACGACCTGC GCGGCGACGA TGGCGACGGT
GAGACGCCAG GGGACGAGTC GACCGGTGCT GACGAGACGA CGGTGTCCGC GCTGGCGGAC
GGCGTGCCGG AACTCGAAAC CGCGTACAAC AGCCGCGAGC AGTACGGTCA GCCCGGTGAC
TCGCTGTACG ACTTCGAGGA CAGTGACGCC TGGGAGGTCA CACAGGGCGA GGGCGAGGTC
GACGAGGACG TCGTCTTCGA CGGGTCACAG AGTCTGCGCC TGACCGGTGA GGAGGACGAA
ACAATCGTCG CGGAGATCGA CGTTCCGGAC GAGGACCTCA CCGGGAAGGA CTTCTCGTTC
GCGATTCGGA CGACGACGCC GCAGAACATC ACGGTCAACC TGCGCGTCGT CGACAACTTT
GGTAGCGATC GCTACTACTC GCTGCGCGAA ATCACCTATC GTGAGCCTGA CGTTGGCTGG
TTCCGCTCGA GTCCGGGCGT CTTCGAGGAG AGCGAGATCG AACCGGCGTT GGACGAGATC
GACCGACTCG AGTTCCAGGT GTTGCACTCG ATGGACGAGG CGGAGGTCTG GATTGACGAC
ATCCGAACCC ACGACCGGCC CGAGCAGGGA TACGTGATGC TGGTCTGGGA CGACGGCTTC
AGCGACTACT ACGAGACGGC CTCGCCGATG CACGACGAGT TCGGGTTTAC GACGATTCAG
GCACCGGTGC CACAGTGGAC CGAGGAAGCC CGCGACGGGA TCATGACGGT CTCGGAACTC
CAGGAGCGTC AGGAGGAAGG CGACCAGATC GTCGTCCACG GGACGCACAA CCCGATCCAC
GAGTACGAGG ACGAAGACGA AATCGAGACG CGCGTCCGCG GCGACAAACA CTGGTTCATC
GAGAACGGGT TCGAGGGCGC GAACTACATC GTCTACCCGC ACAACAGCTA CGACAAGACG
AGTCTCGAGT ACTTCACGGA CTACCACTAC TGTGGCGGCT TCAACCAGTC CGGCGATGTC
AACCTGACCA ACGTCTACGG CTTCGATCCA CTGGCACTGC CCCGCACCAT CGGCCACGAC
CTCGACATCT CGAAGCGCTG TGTCGACCTC GCCGAGGCAC ACAATCAGTG TACCATCCTG
AACTTCCACG CCTTCGACCA GGATAATACG ATGAACGAGG ACGACTACGA GGAGCTACTC
GAGCACATCG ATCAGGCCGA CGTCGAGGTT ATCGACTTCG ACGACCTGTG GGAGCTTCGA
ACAGACCCAT TCTAA
|
|---|
| Protein sequence | MADNRMTRRR LLAGSSVAAA AGLAGCTDRL DDLRGDDGDG ETPGDESTGA DETTVSALAD
GVPELETAYN SREQYGQPGD SLYDFEDSDA WEVTQGEGEV DEDVVFDGSQ SLRLTGEEDE
TIVAEIDVPD EDLTGKDFSF AIRTTTPQNI TVNLRVVDNF GSDRYYSLRE ITYREPDVGW
FRSSPGVFEE SEIEPALDEI DRLEFQVLHS MDEAEVWIDD IRTHDRPEQG YVMLVWDDGF
SDYYETASPM HDEFGFTTIQ APVPQWTEEA RDGIMTVSEL QERQEEGDQI VVHGTHNPIH
EYEDEDEIET RVRGDKHWFI ENGFEGANYI VYPHNSYDKT SLEYFTDYHY CGGFNQSGDV
NLTNVYGFDP LALPRTIGHD LDISKRCVDL AEAHNQCTIL NFHAFDQDNT MNEDDYEELL
EHIDQADVEV IDFDDLWELR TDPF
|
|---|
| |