| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_2708 |
|---|
| Symbol | |
|---|
| ID | 8825564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 2790445 |
|---|
| End bp | 2791341 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | SecD/SecF/SecDF export membrane protein |
|---|
| Protein accession | YP_003480826 |
|---|
| Protein GI | 289582360 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTATT TCGACGTACC GGACATATCG TACACCCGGT ACACGAACCG CCAACTTGCG
GCGGTACCAC TTGCAGTCCT CGCCGTCGCG TTGCTCATTC TGAGCGGTTC GTTTCTCCTG
ACCGGCACGC CGGTCCCGCT CGGTATGGAC TTCGCAGGCG GTGCAGAGCT GACGGTCCAG
ACGACGTCTT CACAGGCGGA GATTGAAGAA GCGTTCAGCG TTGAGCCGGA CTCCGTGCAG
GGAATTCAGG CACCTGGCGT CGAGAACCAG TACACCGTTC AGTTTGCCGG TATCGAGGAC
CAGGACGCGA TTCAGGAGTT GAGTAGTCAA GCCGAGACGG AACTCGCCCA GGATGGCGAT
AACGAAATCG TCCAGCAAGA ATCGACGGCG TCACCGAGCT TCGCAGCACA GACCCAGCAG
ACCGCGCTGC TCGGTCTCGG CGTCGCGTTC GCCGGCATGA GCGTGCTCGC GTTCTTGCTC
TTTCGAACGT TCGTGCCGTC GATCGCAATC GTCGCGTCGG CGTTTTCGGA CATTATGATC
CCGCTCGCGT TCATGTCGGT TGCAGACATT CCACTCTCGC TCGGGACGGT TGCCGCCCTC
CTGATGCTGA TCGGATACTC GGTCGACTCG GACATCCTGT TGAACACGCA CATCCTCAGA
CGCGGCGGTG ACTTCTACGA GAGCACCTAC CGTGCGACGC GGACGGGTGT GACGATGACC
GTGACCTCGA TGGCTGCGAT GCTCGTTATG GGAATCGCCG CCACGCTGTT CGGCGTCGAA
CTGCTCGCGT CGATCGGGAT CATCCTCTTC ATCGGCCTCG CAGCAGACCT TATGAACACG
TACCTGTTGA ACCTCAGTCT CCTTCGGTGG TACAAGTTCC ACGGGGTGCG ATCATGA
|
|---|
| Protein sequence | MGYFDVPDIS YTRYTNRQLA AVPLAVLAVA LLILSGSFLL TGTPVPLGMD FAGGAELTVQ
TTSSQAEIEE AFSVEPDSVQ GIQAPGVENQ YTVQFAGIED QDAIQELSSQ AETELAQDGD
NEIVQQESTA SPSFAAQTQQ TALLGLGVAF AGMSVLAFLL FRTFVPSIAI VASAFSDIMI
PLAFMSVADI PLSLGTVAAL LMLIGYSVDS DILLNTHILR RGGDFYESTY RATRTGVTMT
VTSMAAMLVM GIAATLFGVE LLASIGIILF IGLAADLMNT YLLNLSLLRW YKFHGVRS
|
|---|
| |