Gene Nmag_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_1028 
Symbol 
ID8823859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand+ 
Start bp1049884 
End bp1050528 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003479174 
Protein GI289580708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.196411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGG AGTGTCTCGC CGTCGAATTT CGCGTCCACG ACGACGACTG CCCGCTCGCC 
GAGGCAACCC GCGCCGTCGG CGACGGAATC GACGTCGACG CCCGTCCACC ACAGCGGCGC 
GACGACGGCT ACGACCTCCT CCAGTTCAGT TCCGCCCAGT CCGACGCGCT CGTCGACCAA 
CTCGAGTCCG ATGACCGCAT TCGCTACCTC CACGTCTCCC GAACGAACGG GCGCTCTCGG 
TACCGCTGTC TCTCGAAACA GCCCTGCGTG GTCCACCGGC TCGTCGATGC CGGCCTGATT 
GTCGAAACCC TCCAGTACCG CGACGGTGCG GCTATGATCT TTGGTGCTGT GGTTGGCCGA 
GACGTTCTCA AGGGCGTCAT GGAAGCCGCG GGGGAGACGG TCGGTGTCCG ACTCGAACGC 
GTCTACCCGC TCCAGGCCGA AGCCAGGGAG ACGCCGACCC AGCGGTGGGA CCTCACCCCA 
GCCCAGGAGG AGTGTATCCG GACGGCACTC GAGATGGGCT ACTTCGCGAT TCCTCGTGAG 
ACGTCCTCGG AGTCGGTCGC GGCGGAACTG GGGATCAGCA AGTCGGCATT TCTGGAACGG 
CTTCGGCGGG CAGAAGAGGC ACTGTTCCGC CAGATTTTCA GTTGA
 
Protein sequence
MIEECLAVEF RVHDDDCPLA EATRAVGDGI DVDARPPQRR DDGYDLLQFS SAQSDALVDQ 
LESDDRIRYL HVSRTNGRSR YRCLSKQPCV VHRLVDAGLI VETLQYRDGA AMIFGAVVGR 
DVLKGVMEAA GETVGVRLER VYPLQAEARE TPTQRWDLTP AQEECIRTAL EMGYFAIPRE 
TSSESVAAEL GISKSAFLER LRRAEEALFR QIFS