Gene Nmag_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_0874 
Symbol 
ID8823703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand
Start bp890839 
End bp891522 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003479020 
Protein GI289580554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.283997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCA TCGCCGAGTT CACGCTTCCC GCCGACGCAT TCGCTCTCGG AGACACGTTC 
GACCGCATCG GCGAGGCAAC CATCGAGGTC GAACGACTCG CCACCCACAG CCGGGAGTGG
ATCATGCCCT TCCTGTGGGT CTCTGACTGT GACATCGACG CGATGGCTGC TGCACTCGAG
TCCGACTCGA GCATCGAGGA ATTCGAACTC CTCGACCAGA AAGAAGACAT CGCCTACCTC
AACGTCCACT GGACCGAACC GGTACAGCAA CTGGTCGACG AGATCGTCAA TCAACACGGG
ATCATACAGG AGGCGCAGGC GACCGATGGC CGCTGGTTTC TCAAACTCAA ATTCGTGAGC
CAGACCGCAG TCAAGGGGTT CCAGCGCTAC TTTCAGGAGA AAGAGTACAC CTTCGAACTC
CAGCGCATCT ACGACGGCAC CGCCCCGAGA GAACGTGAGT ACGAACTCAC CACCGAACAA
CGGGAGGCGC TCGTCGTCGG ACTCGAGTTG GGCTACTTCG CCATCCCCCG CAACGCACAG
ATTAGCGATC TGGCTGACGA ACTCGGCATC TCGACGAACG CGGTCTCACA ACGATTGCGC
CGAGCGACGG CGAATCTCAC GCAGAATACG CTGGTCGTCT CGAGTGAGCG TGCTGAGACA
GCGTCCGGCG AGAGCGATGG GTGA
 
Protein sequence
MSVIAEFTLP ADAFALGDTF DRIGEATIEV ERLATHSREW IMPFLWVSDC DIDAMAAALE 
SDSSIEEFEL LDQKEDIAYL NVHWTEPVQQ LVDEIVNQHG IIQEAQATDG RWFLKLKFVS
QTAVKGFQRY FQEKEYTFEL QRIYDGTAPR EREYELTTEQ REALVVGLEL GYFAIPRNAQ
ISDLADELGI STNAVSQRLR RATANLTQNT LVVSSERAET ASGESDG