| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_0106 |
|---|
| Symbol | |
|---|
| ID | 8822925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | + |
|---|
| Start bp | 130330 |
|---|
| End bp | 131523 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | Spermidine/putrescine-binding periplasmic protein-like protein |
|---|
| Protein accession | YP_003478266 |
|---|
| Protein GI | 289579800 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACATC GACGCAACAT ACTCAAAGGT GCAGCAGGGG TTGGGTTAGC TAGCCTTGCC
GGTTGCCTCG GCGGGGACAA CGGCGGTGTA GACACTCGCC CGATCGAAAT CGACTTCGAC
GACTGGCCGC CGGAGGAGTA CGGCGACAGC CTTCACGCCT GGAACTGGTA CGCCGAGTGG
AACGAGTGGG GTGCCGAGGC GTTCGCCGAG GAGTACGACC TGAACAACTT CGAAACAGAG
GCGTACTCGA CGCCAGCGGA CTGGTTCACG AACATCGAAG CGAACCCGGA GGGCCACGAC
ATCGACAACG TCGGCCTCAG CACGAACTGG ATCCACGAGG CGAACGAGCA GGATATGCTG
GAACCGATTC CGGTCGACGA GATGCCGAAC GTCGACGTCA TCGACGACTA TTTCGACCTC
CACCGGGAGG AGTTCTGGAG CGACGAAGGA GTCGGCGGCG TGTACGGCGT TCCCCACTCG
ATCGTGCTCG GGCCGGTCGT GGTGTACAAC ACCAACGAAA TCGAGGACCC CACGGAATCG
ATCGAGATCC TCTGGGATGA GGAGTATGCC GACGAGATGT CGATCTTCGC CCACCAAGCG
GGGTTCTTCT GTGAACTCGG TGCCCTCTAC ACCGGCCAGG ACCCGAACGA CCCCGACGAC
TTCGAGGAGA TACAGGAGGT ACTCGAGCAA CAGCGTGATC TCGTGTTCAA CTACGGCGAC
GAACACGAAA CGCAGATGCA GTTGCTCATG AGCGGCGATG CAGCCATCGG GACGCACACG
GACGGTCGAG CGTTCAGGGC GATGTACGAC CACGACGGCG ACGTCGACTG GTTCATTCCC
GAGGAGGGAT CGGTTATCTC GCCGAACGAA CTCGCGATTC CGAAACATGC CCCACACCCC
GTCGTCAGCA CCATGTTCAC CGACTTCATG TTCCGAGATG AAAGTCTGGA GAAGATGGTC
GAGACGACGG TGTACCGCCC ACCGCTGGAA AACGAGGAGT TTACCGACGG CGAACTCGGC
CAGGCGATTC GCGAGAACTG GGACGACTGG GGCAAAACCG GCGACCCGGA GGACTTCATC
GATGATCTCG TGATCACCGA TGACGAGATG GATCGCCTCC ACCCCAACTG GCCCCGTTCG
GACGAGGTTA TCGAACGGTA CGACGAGATC TGGACCGCGG TTACCGCGGG GTGA
|
|---|
| Protein sequence | MVHRRNILKG AAGVGLASLA GCLGGDNGGV DTRPIEIDFD DWPPEEYGDS LHAWNWYAEW
NEWGAEAFAE EYDLNNFETE AYSTPADWFT NIEANPEGHD IDNVGLSTNW IHEANEQDML
EPIPVDEMPN VDVIDDYFDL HREEFWSDEG VGGVYGVPHS IVLGPVVVYN TNEIEDPTES
IEILWDEEYA DEMSIFAHQA GFFCELGALY TGQDPNDPDD FEEIQEVLEQ QRDLVFNYGD
EHETQMQLLM SGDAAIGTHT DGRAFRAMYD HDGDVDWFIP EEGSVISPNE LAIPKHAPHP
VVSTMFTDFM FRDESLEKMV ETTVYRPPLE NEEFTDGELG QAIRENWDDW GKTGDPEDFI
DDLVITDDEM DRLHPNWPRS DEVIERYDEI WTAVTAG
|
|---|
| |