Gene TK90_2570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2570 
Symbol 
ID8808354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp2712538 
End bp2713320 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_003461795 
Protein GI289209729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.54092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0246673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCTGA TCGATACACA CGTCCACCTG GACCTGGACG CGTTCGACCC GGATCGCCCG 
GCGGTGCTGG ACCGCGCCCG CGCCGCCGGG GTGCAGGAGC TGGTCCTGCC AGGCGTCACC
CGCGCGCGCT GGCCGGACCT CGACGCCCTC CACCGCCAGC ACGCGGGTCT GCATATCGCC
TACGGCCTGC ACCCGATTTT CCTGCAGGAT CATGCGGACG CGGACCTCGA CGCCCTGGAG
GCCTGGCTGG AGATGCACCC GGAGGCCATC GCGGTCGGCG AGATCGGGCT CGATGGCTAC
AAGGACGGGC TGGACTGGGA CCGCCAGTGG CGCTTCTACA CGCGGCAGCT GGCGATCGCC
CGCGAACGCG ACCTGCCGGT GATCATCCAC AGCCGCCGGG CGCTGGACGC GGTCCTGAAG
GGCCTGCGCC AGTACCCCGG CGTGATCGGC ATCCTGCATG CCTTTATCGG CTCGCCGCAG
CAGGCCCGGC AGGCGGCGGA TCTCGGCTGC TGCCTGGGCA TCGGCGGGCC GGTCACCTAC
GAACGTGCGA AACGACTGCA CCGCGTGGTG CGCGAGGCCC CGCTGGAGGC CCTGGTCGTG
GAGACCGACG CCCCGGATCA GCCGCTGGCC GGGCACCAGG GCGAGCGCAA TGAACCCATG
ATGACCGCCG AGGTGAACCG CCATCTGGCC CGCCTGCGGG ACATCGACCC GGCCGAGATG
GCTATAATCA CGTCACAAAA TGCACGCCGG GTCCTCCGGC TCCCGAACGA CCCGGATTCA
TGA
 
Protein sequence
MHLIDTHVHL DLDAFDPDRP AVLDRARAAG VQELVLPGVT RARWPDLDAL HRQHAGLHIA 
YGLHPIFLQD HADADLDALE AWLEMHPEAI AVGEIGLDGY KDGLDWDRQW RFYTRQLAIA
RERDLPVIIH SRRALDAVLK GLRQYPGVIG ILHAFIGSPQ QARQAADLGC CLGIGGPVTY
ERAKRLHRVV REAPLEALVV ETDAPDQPLA GHQGERNEPM MTAEVNRHLA RLRDIDPAEM
AIITSQNARR VLRLPNDPDS