Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2570 |
Symbol | |
ID | 8808354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2712538 |
End bp | 2713320 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_003461795 |
Protein GI | 289209729 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.54092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0246673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACCTGA TCGATACACA CGTCCACCTG GACCTGGACG CGTTCGACCC GGATCGCCCG GCGGTGCTGG ACCGCGCCCG CGCCGCCGGG GTGCAGGAGC TGGTCCTGCC AGGCGTCACC CGCGCGCGCT GGCCGGACCT CGACGCCCTC CACCGCCAGC ACGCGGGTCT GCATATCGCC TACGGCCTGC ACCCGATTTT CCTGCAGGAT CATGCGGACG CGGACCTCGA CGCCCTGGAG GCCTGGCTGG AGATGCACCC GGAGGCCATC GCGGTCGGCG AGATCGGGCT CGATGGCTAC AAGGACGGGC TGGACTGGGA CCGCCAGTGG CGCTTCTACA CGCGGCAGCT GGCGATCGCC CGCGAACGCG ACCTGCCGGT GATCATCCAC AGCCGCCGGG CGCTGGACGC GGTCCTGAAG GGCCTGCGCC AGTACCCCGG CGTGATCGGC ATCCTGCATG CCTTTATCGG CTCGCCGCAG CAGGCCCGGC AGGCGGCGGA TCTCGGCTGC TGCCTGGGCA TCGGCGGGCC GGTCACCTAC GAACGTGCGA AACGACTGCA CCGCGTGGTG CGCGAGGCCC CGCTGGAGGC CCTGGTCGTG GAGACCGACG CCCCGGATCA GCCGCTGGCC GGGCACCAGG GCGAGCGCAA TGAACCCATG ATGACCGCCG AGGTGAACCG CCATCTGGCC CGCCTGCGGG ACATCGACCC GGCCGAGATG GCTATAATCA CGTCACAAAA TGCACGCCGG GTCCTCCGGC TCCCGAACGA CCCGGATTCA TGA
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Protein sequence | MHLIDTHVHL DLDAFDPDRP AVLDRARAAG VQELVLPGVT RARWPDLDAL HRQHAGLHIA YGLHPIFLQD HADADLDALE AWLEMHPEAI AVGEIGLDGY KDGLDWDRQW RFYTRQLAIA RERDLPVIIH SRRALDAVLK GLRQYPGVIG ILHAFIGSPQ QARQAADLGC CLGIGGPVTY ERAKRLHRVV REAPLEALVV ETDAPDQPLA GHQGERNEPM MTAEVNRHLA RLRDIDPAEM AIITSQNARR VLRLPNDPDS
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