Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2546 |
Symbol | |
ID | 8808330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2683920 |
End bp | 2684654 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Methyltransferase type 11 |
Protein accession | YP_003461771 |
Protein GI | 289209705 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0272722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGAACT CCAGTTTTGA GCAGCGCTGG CGCCAGCGCT TTACCCAGCG CGGCAGCCAG TGCGACGACG ACGCGGCCAT CGCGGGCTGG ACGCCCACCG GGTTGGCCAG CCGGGTACGC CAGTTCCAGT CACTCTGGCA ACAAGCCCGT CCCGAAGGGG CGCGATGGCT CGATATCGGC TGCGGGGCCG GCACCTATAC CCGTCTGCTT CAGGCCGAAG GGCGCAGCCC GATCGGGCTG GACTACTCCG CCCCGTCGCT GCACAAGGCG CGACAGCGCA GCCCCGCGTC GATCGACTGG CTGGCGGCGG ATGTCCACCG CCTGCCGTTC GCCGATGGCG AGTTCGATGG CGTGCTCTGT TTCGGGGTGA TGCAGGCGCT GGCCGACTCG CGCCCGGCCC TCGCGGAGAT GCAGCGCGTG CTGCGCCCCG GCGGCGAGAT CTGGGTGGAT GCGCTGAACG CCAGGACCTG GCCCACCGTG TTGCAGGAAC GCCGACGGGT CCGGGCCGGA AAGGCACCCC ATCTGCGCTA CGAGGCGCCC GACTCGCTGC AGGCGGCCGC GAGGGCGGCC GGCCTGCGGT CGCTGGCGTG TTACTGGCTG CCCCTGGTCC CGGGCCGACT GCACGGGCTC CAGGGCCCGG CCGAAAGCCG CTGGGCGAGG GCCCTTTGGC AGGCATCGCC GTGGATCGCG GAGCGGTTGT GTCACTCGTT CATCCTGCGT GCACGCAAAG ACTGA
|
Protein sequence | MTNSSFEQRW RQRFTQRGSQ CDDDAAIAGW TPTGLASRVR QFQSLWQQAR PEGARWLDIG CGAGTYTRLL QAEGRSPIGL DYSAPSLHKA RQRSPASIDW LAADVHRLPF ADGEFDGVLC FGVMQALADS RPALAEMQRV LRPGGEIWVD ALNARTWPTV LQERRRVRAG KAPHLRYEAP DSLQAAARAA GLRSLACYWL PLVPGRLHGL QGPAESRWAR ALWQASPWIA ERLCHSFILR ARKD
|
| |