Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2525 |
Symbol | |
ID | 8808309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | - |
Start bp | 2656593 |
End bp | 2657111 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003461751 |
Protein GI | 289209685 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0433419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCAAACCC GGCCACTGCG AGGGCGGCGA GATGATGGAT GCGCTGGTGC AATCGCCCCC GCGCGCTATG CGTTCATCGA TCTGGGGTCG GGCAAGGGCA AGGCGCTGCT ACTCGCGTCG CATCACCCGT TTCGGCGGAT CATCGGGGTC GAGTACAACC CCCGCCTGGA TGCGATCGCC GCCGCGAATG CGCGGATCTA CCGGCACCCC GAGCGCTGCA TGCACCGGAT CGAAACCGTC TGTGGCGACG CCGGTGCGTT CGAGTTGCCG CCGGGCGACC TGCTGATCTA CCTGTTCAAC CCCTTCAAGG CCGCGATCAT GGAGCGCGTG CTCGCGAACC TCGAGAGCGC CCTGCAGGCC GACGGAGAGC GGGACGTGCT GGTCGTGTAC CAGAACCCGA CCCAGCGAAG GCTGCTGGAC GAGGCCCCGT TTCTGGAGCG GGTGGCCTAC CGGGAGTACC GCACCAGGCG GCTGCGAAAG ATGCCGATCG GTCGTGTCGC GGTGTACCGA AACCACTGA
|
Protein sequence | MQTRPLRGRR DDGCAGAIAP ARYAFIDLGS GKGKALLLAS HHPFRRIIGV EYNPRLDAIA AANARIYRHP ERCMHRIETV CGDAGAFELP PGDLLIYLFN PFKAAIMERV LANLESALQA DGERDVLVVY QNPTQRRLLD EAPFLERVAY REYRTRRLRK MPIGRVAVYR NH
|
| |