Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2442 |
Symbol | |
ID | 8808223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 2562628 |
End bp | 2563275 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Protein of unknown function DUF1826 |
Protein accession | YP_003461668 |
Protein GI | 289209602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGA AAAACCAATC CGCACATCGC CCCGGGCCCT CCAGTCGTCA TCGCTTCGTC GACCAGTCCA GGGAGCTCCT GGGCATCCAC CGTGAAGAGG TCAATGCACT GATCTGGAGA CGACCACTGG ACCTGGCCCT GTCGACTCAG TCGGAAGCCC TGGCCAGTAC CGAGCCGGGT ATGCTGCTGG ATATCCGCTG CCGTCCCGAC CAGGTACGGC TCCGGCTCCT GGAAGCCACC GGACAGCCCC CGTTCCAGGT CCATCTGCTG GGCCGGGACA TTGAGCATCT CGCCCGCGCA TTCGCCATCG TTGCGAGCGC GGTCAGCATC AGCATTCAGC TTGAAGTCCT CGATCATCAG CCCTGCCGCC TGTTCCATGT GGACAACAAT GTCCTTCGCA TGTTATGCAC CTATTTCGGG CCCGGGACCG AGTACGCGGA CGAGCGACAT CTGAACCGCG AACGACTGCA ACAGAACGAC AACGAGGGCG TGCTAGGCGG GCGCCCCCCG TTAATCACCG AAGCCGGACA GGCCATCCTG ATGAAGGGCA AACGCTACGC GTCGGAAAAT GGGCGCGGCG CGGTGCATCG ATCGCCACCC GTTCCCGCGG GCCAGCGCCG CCTCGCGCTC CGTCTGGACT ATCCATAG
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Protein sequence | MSPKNQSAHR PGPSSRHRFV DQSRELLGIH REEVNALIWR RPLDLALSTQ SEALASTEPG MLLDIRCRPD QVRLRLLEAT GQPPFQVHLL GRDIEHLARA FAIVASAVSI SIQLEVLDHQ PCRLFHVDNN VLRMLCTYFG PGTEYADERH LNRERLQQND NEGVLGGRPP LITEAGQAIL MKGKRYASEN GRGAVHRSPP VPAGQRRLAL RLDYP
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