| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2380 |
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| Symbol | |
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| ID | 8808161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2498982 |
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| End bp | 2499806 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | nuclease (SNase domain protein) |
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| Protein accession | YP_003461606 |
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| Protein GI | 289209540 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00295748 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.102212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGTGC CAAGCAACGA GGGCGCCCTG CGGGGCGCCC TCGTTTGTTT CGTCTCGCTG
TCGGCGTGGC TGCTCGCGCC GGTGGCCGCG GCGCAATGTG CGCTGGAGGA CCACGATCCG
CGCGATCTGC AGCGCGTGAC GGTCGAGCGT GTGTGGGCGC CGGATGCCCT GGAACTGGAA
GACGGGCGAC ACATCCGTCT GCTGGGTCTG GCACCGGTGG CCCCGCTTCC GCCGGTTGCG
CCACAGCTGC TGCCAGTCGG CTTCGGGCTG GACTTGAGCG AGTCCCTGGA GGAACGCCTG
CGCGGCGTCG GTCAGCGCCT GGTGCTGTTG CCGGGGCGTC CGGCCCGCGA CGCCTATGGC
CGCCTGCGCA TGCATGCCTG GATCGACGAT GGGCCGCTGC TGGCGGCCAG CCTGATTGGG
GATGGCCTGG CGATGCCGCG CCCCGGGCCG GAACCGGGGC CCCTGGACGA GTGCTATTAC
GGGGCCGAGG CCGCGGCACG GGAAGCGCCG CGAGGGCTCT GGCTGGAGCG GCTCGAGGCC
CTCCCGGTCG GCTGGCTGGA GCCACCGCGC GAGCGCTCGC AGGGGCGGTT GCGGGTCCAG
GGCGAGGTGA TCGACGTGCG CGTGCGCGAC CCGCACTGGG TCCTGGTCCT GGACGGACTG
CTGGACCTGC TGATCTCCGG GGATGATCGC GATTTTTTCG AGGATATGGA ACCCCGCTCA
CTGCTGGGTA ACACCGTTGT TGCACGCGGC ACGGTGTATC CTTGGAGGGA GCGAGGGCGG
ATGCGGATCC GCCACCCCTT TGATCTCGAG GTACTTGATC GATGA
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| Protein sequence | MLVPSNEGAL RGALVCFVSL SAWLLAPVAA AQCALEDHDP RDLQRVTVER VWAPDALELE
DGRHIRLLGL APVAPLPPVA PQLLPVGFGL DLSESLEERL RGVGQRLVLL PGRPARDAYG
RLRMHAWIDD GPLLAASLIG DGLAMPRPGP EPGPLDECYY GAEAAAREAP RGLWLERLEA
LPVGWLEPPR ERSQGRLRVQ GEVIDVRVRD PHWVLVLDGL LDLLISGDDR DFFEDMEPRS
LLGNTVVARG TVYPWRERGR MRIRHPFDLE VLDR
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