| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2225 |
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| Symbol | |
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| ID | 8808005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2342610 |
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| End bp | 2344253 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003461451 |
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| Protein GI | 289209385 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.17933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGCAA CCCGATTGCT GCTCCCCGTC GTATCGGTGC TGTTCCTCGC CGGTTGCGCG
GTTACCGCGC CCGAGCTGGA TCGCTCCGAA ATGGCGGAGG ACATCTCGGT GCAGGGGATC
GACCTGCCCG AGTCGGAGAT GCCCCGACCC TCCGGCGAGC TGACGCTCGA GGAGGCGATT
CATCAGGCCC TGTGGCGCAA CCCGCGCATG CAGCAGGCCT ACGCCAAACT GGACCTGACG
GCCGCCGATG TGGTCGAGGC CTCCCAGTTT TCCAATCCCA CCTTGTCGCT GTCGGTGATG
CGCCCGGAGG GCGGGGGCGG CAACGAGTAT GGCGTCGGTC TGGCCTGGGG CCTATCCGGT
CTGCTGATGC GCAGTGCCCG TCAGGACATT GCCGAATCCC ACTGGGAGTC CACCCGTCTG
CAGCTGGCCG AAGGCATGGT GGCCCTGGCC TCGGACACCG AGCGTGCCTG GTATGACGCG
GTGGCTGCGC GCCAGCGAGT TCAGGTGCAG GCGCTGGAGA CCCGCGCGGC GGATCTTGGG
TCGCTGCTGG GCGAGCGCTT TTATGACGCC GGCAATATCA CCGACCTGAA GCGGGCACAG
CTGCGCATCC GCGCAGCCGA GGCGCGGCTG AAGCTCGAGG ATGCCCGTCA GCGTGAACGC
GAGACACGTC TGCGTCTGGC CCACCTGATG GGGCTGCCCG GCGAGGTCGA TGACTGGGAG
GTCCCGGGCA AGTTGCCACT GCCATTGGCC GGGGTTGACG ATCGCGAGGC CCTGGTGGAG
CAGGCCCTCG AGCAGCGTCT GGATTTGCGG GCCCTGGATC ATGCCCTGGA AGGGTTCACC
GAGGGGGTGG CCCTGGTGCG GCGTTATCGC TGGCTGGGCG ACATCGAGCC CGGGATCGAG
TTCGAGCGCG AGACGGACGG CACCCGCCTG TGGGGCGGTG GCATTTCGTT CACCCTGCCA
ATCTTCAACC AGAACCAGGC CGGTATCGCC CGTGCCGAGG CACGGCTGGA GGATGGCGAA
GCCCGACGCG CCCAGCTGGA GCAGGCGATC ACCGCCGATG TCCACCAGCA CCTTGTGCGC
CTGACCCATC ATCGTGACAA GTTCAGTGCC AAGCGCTACG AGCTGTTGCC GGCCCGCGAG
ATCGAGCTGG AGCGCATGCA GGAGCGTGTG AACTTCATGT TCGATGATGT CTTCGACCTG
CTGGTGACCA AGCAGGAAGA GCTGGCCGAC TGGCAGCGGG CCGTGGCCGC GCTGGGTGAC
TACTGGCGGG CCCGCGTGGA TCTGGCCTTT ACGGTGGCCG GCGAGCTGCC GGATGGAGCG
CCGGGTGACG AGGGCTATCT CGAGACCGAC GCGCTTGAAC ACGACCCGTC CGCGATGGAC
CACGGCGACC ACGGCGACCA CGGGGATCAC GGGGATCACG GCGACCACGG GGATCACGGG
GATCACGGGG ATCACGGGGA CCACGGCGAT CACGGGGATC ACGGGGATCA CGGGGATCAC
GGCGACCACG GGGATCACGG GGATCACGGG GATCACGGGG ATCACGGGGA TCACGGGGAT
CACGGAGATC ACGGAGATCA CGGAGATCAT GACCATGGCG ATCACGGTGA CCACGGCGAC
GACGGTCACG GAGGGCATCA CTGA
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| Protein sequence | MRATRLLLPV VSVLFLAGCA VTAPELDRSE MAEDISVQGI DLPESEMPRP SGELTLEEAI
HQALWRNPRM QQAYAKLDLT AADVVEASQF SNPTLSLSVM RPEGGGGNEY GVGLAWGLSG
LLMRSARQDI AESHWESTRL QLAEGMVALA SDTERAWYDA VAARQRVQVQ ALETRAADLG
SLLGERFYDA GNITDLKRAQ LRIRAAEARL KLEDARQRER ETRLRLAHLM GLPGEVDDWE
VPGKLPLPLA GVDDREALVE QALEQRLDLR ALDHALEGFT EGVALVRRYR WLGDIEPGIE
FERETDGTRL WGGGISFTLP IFNQNQAGIA RAEARLEDGE ARRAQLEQAI TADVHQHLVR
LTHHRDKFSA KRYELLPARE IELERMQERV NFMFDDVFDL LVTKQEELAD WQRAVAALGD
YWRARVDLAF TVAGELPDGA PGDEGYLETD ALEHDPSAMD HGDHGDHGDH GDHGDHGDHG
DHGDHGDHGD HGDHGDHGDH GDHGDHGDHG DHGDHGDHGD HGDHGDHGDH DHGDHGDHGD
DGHGGHH
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