| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2040 |
|---|
| Symbol | |
|---|
| ID | 8807815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2162968 |
|---|
| End bp | 2164128 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | succinyl-CoA synthetase, beta subunit |
|---|
| Protein accession | YP_003461267 |
|---|
| Protein GI | 289209201 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCC ACGAATTTCA GGCCAAGGCG CGCTTTCGCG ACGCCGGCAT CCCCGTTCCC
GACGGACAGG TGATCACCCA CACTGACGAA CTCCCCGCGG CCTGGCAGGC ACTGGGCGCC
GAGCGTGTGC TGGTCAAGGC TCAGGTGCAT TCCGGCGGAC GCGGCAAGGC CGGTGGCGTG
GTGATGGCGG ATTCCCCCGA GGCCGCGCGC GAGGCGGCGG AGAAGCTGCT GGGCTCGCGT
CTGGTCACCG GGCAGAGCGG CCCCGAGGGC CTGCCGGTGG ATCAGCTCCT GCTGGAGCCA
GCCGCGGACA TCGCCCGCGA GTTCTATTTC GCCCTGCTGG TGGACCGGGC CCGCGAGCGC
CTGGCGCTGG TGGTCTCCGC CGAGGGGGGC ATGGACATCG AAACCCTGGC CGCCGAGCGG
CCCGAGGCGG TGATCACCCT GCCGATCCAC CCGGCCACGG GCGTGATGCC GTTTCACGGA
CGGCGGGTCG CGTTTGCCCT CGGGCTGTCG GGCGAGCCGG CCAAGGCGAT GGCGCAACTG
GTGACCAATG CCCATGCCCT GTTCCAGCAG GTGGATGCGC AGCTGCTGGA GATCAACCCG
CTGGTGCTGA CCGCTGACGA CCAGCTGCTG GCCATCGACG CCAAGCTGAC CGTGGACGAC
TCCGCCGCCT ACCGCCAGAA GGCGCTGATG GCCGAACGTG ACGCGCGCCA GCGCGACCCG
GCCGAGGAAG AGGCGCACGA GCACGACCTC AACTACATCC GCCTGGACGG CTCCATCGGC
TGCATGGTGA ACGGCGCGGG GCTGGCCATG GCCACGATGG ACCTGATCAA GCACCACGGT
GGCGAGCCGG CCAACTTCCT GGATGTCGGC GGCGGCACGA CGGTGGAGCG GGTCACGGCC
GCGTTCAAGC TGATCCTGTC GGACCCCTCG GTGAAGGCGG TGCTGGTGAA TATCTTTGGC
GGCATTGTGC GCTGCGACCT GATCGCCGAG GGCATCATCG CCGCGATCCG CGAGGTGCAG
GTCCAGGTGC CGGTGGTCGT GCGGCTGGAG GGTACCAACG CGGAACAGGG CCGCGAGGCG
CTGGCCAGCT CCGGTCTGGA CGTGATCCCG GCCGCGGACC TCGACCGCGC GGCGCGCACC
GTGGTGGAGG CCGTGGCATG A
|
|---|
| Protein sequence | MNLHEFQAKA RFRDAGIPVP DGQVITHTDE LPAAWQALGA ERVLVKAQVH SGGRGKAGGV
VMADSPEAAR EAAEKLLGSR LVTGQSGPEG LPVDQLLLEP AADIAREFYF ALLVDRARER
LALVVSAEGG MDIETLAAER PEAVITLPIH PATGVMPFHG RRVAFALGLS GEPAKAMAQL
VTNAHALFQQ VDAQLLEINP LVLTADDQLL AIDAKLTVDD SAAYRQKALM AERDARQRDP
AEEEAHEHDL NYIRLDGSIG CMVNGAGLAM ATMDLIKHHG GEPANFLDVG GGTTVERVTA
AFKLILSDPS VKAVLVNIFG GIVRCDLIAE GIIAAIREVQ VQVPVVVRLE GTNAEQGREA
LASSGLDVIP AADLDRAART VVEAVA
|
|---|
| |