| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1965 |
|---|
| Symbol | |
|---|
| ID | 8807739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2085921 |
|---|
| End bp | 2087120 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | putative signal transduction protein |
|---|
| Protein accession | YP_003461192 |
|---|
| Protein GI | 289209126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.543809 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGAGG AACGTCTTCC ACAACTGGTC CCGTTCGCCG ACCTCGGCGA GCGCGCGCAC
CACAAACTCC TCCAGCACGC CAGCACCCTG GATATCAAGC CCGGTCTGAA ACTGCATGCG
CGTGACGAAT GGCGCCATCT GATCTTTCTA CTTGAAGGCC GGGTAATCCT GTCTGACGAC
GGCCAGTCGG TCATCCTCAA GGGCGGCAGC CCGGAATCCC TGAACCCGCT GTTCAATGAA
CGCGACTACC ACAGCCACGC GATCGCGGCG AGTAGCGGGC GTATCGCCCT GTTCGACCGA
AAGGTTTACG AGAACCTGAT CGACGGTGCA CGCGAAGGCG TGGAAGTCAG CGAGATCGAG
CTGTCCGACC TCGAAGGGGA GCTGTTCACC GGCATCTACA CCCGTGCCCT CTCCGGCGAA
CTACAACTGC CGCAGTTGCC GGAAGTGGCG CTGCACCTGC AGGCGGCGCT CAAGGACCCG
GACGTCGATA TCGAACGGGT CACCCGCATC ATCGAGGAAG ACCCCAGTGT CGCCGCGCGC
CTGCTGTCGG TGGCCAACAG CCCGGCAATG GGGAGTCAGC GCGAGGTCTC GCGGCTGGCC
GATGCGGTCT CCCGCCTCGG CCTGGAACGG ACCCGCCAAC TGGTGATGGC GCTCGCCGCG
CACCAGGTCT TCATCCAGCG CGGCAGCCCT TACCACGGCC TGCTGGAACG CCTGTGGCGC
CGTTCGGCCC GAATCGCGGC CATCAGCTGC GTGCTGGCTG ACCAGAGCGA GGCAGTCGAT
CCCCAAAAGG CCCTGCTGGT CGGCCTGCTG CATCGCGTCG GCGCATTGCC CATCATCGGC
GAGGTCGCCC GCAGCCACCC CGACCGCAGT GCCGAGGACA TCGAACGCAT CCTCTATCGC
CTGGAAGGCC TGATCGGCGA ACTGGTTGCC CAACAATGGG GTCTGGCATC CGATATCATG
GAGGCCATTC GCGAATCCGG CGGTCCGGAA ACGGCCACGG CAGCACCGCT GACGGACATC
GTGCGCATCG CTCGCAGCGC CTGCACGCGC GACGGCGACG ATGCCCTGGT GGACCGCACG
CCACTCGCCG AGTTAAACGC CGTGACCCGA TTCGGCTTCG TGCTCGACAA CGACGGGCAG
CTGCCTGCAA TCGACACGGC CCGCCGCGAA ATCGATGCGC TGATCCGCGA GGTCGCCTGA
|
|---|
| Protein sequence | MLEERLPQLV PFADLGERAH HKLLQHASTL DIKPGLKLHA RDEWRHLIFL LEGRVILSDD
GQSVILKGGS PESLNPLFNE RDYHSHAIAA SSGRIALFDR KVYENLIDGA REGVEVSEIE
LSDLEGELFT GIYTRALSGE LQLPQLPEVA LHLQAALKDP DVDIERVTRI IEEDPSVAAR
LLSVANSPAM GSQREVSRLA DAVSRLGLER TRQLVMALAA HQVFIQRGSP YHGLLERLWR
RSARIAAISC VLADQSEAVD PQKALLVGLL HRVGALPIIG EVARSHPDRS AEDIERILYR
LEGLIGELVA QQWGLASDIM EAIRESGGPE TATAAPLTDI VRIARSACTR DGDDALVDRT
PLAELNAVTR FGFVLDNDGQ LPAIDTARRE IDALIREVA
|
|---|
| |