| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1954 |
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| Symbol | |
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| ID | 8807728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | - |
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| Start bp | 2076659 |
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| End bp | 2077642 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | sigma E regulatory protein, MucB/RseB |
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| Protein accession | YP_003461181 |
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| Protein GI | 289209115 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.252367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGTG GGCTGCCGCT CGTTCTGGCC GCAACCGCGC TCTGCCTTCC GGCACAGGTC
CTCGCGGACG AGGCCTCGCC GTCGGAATGG CTCGAGCGCA TGACGACAAG CCTGCATGCG
GAGAGTTACC AGGGCACCTT CGTGTTGCAG CGCGATGACC GCATCGACAC CATTCGCGTG
GTGCATGTCG CCGAGGATGG TGGCTACCGC GAACGTCTGG AAACCCTGAC TGGCGCCGAA
CGCGAGATCC TGCGATCGGT GGACCGACTG AGCGCTATCA AGGGCGCGCG CGGCGCGTCG
GGCGATGGTG CGCAGTCGCC GCTGGGGCCT GCCGGTGCGC CCGTTTCCCT GCTGCAAGAA
CACGACCTCT ATTCCCTGGA CATCCAGGGC CTGGACCGCG TGGCCGGTTA TCCCTGCACC
CTGATTCTGG CGCGCGCGCG GGATGCTCTG CGCTACAGCC ATCGCTACTG TCTCCATATG
GACAGCGCCC TGCCGCTCCT GAGCGAGCTG TACGACCCCA AGGGCAAGCT GCTGGAGCGG
CTTGCCTTCA CCGATCTGGA GTTGAGCGGC GAGATCGCCG AGAGCGAACT CGAGCCGACG
ACCGATCAGG CCGAGCACAT CGAGGTGCGC GCCGATCGCG GCCACAAGAA GCCCCAGTGG
GACGACGACA ACGGCCTGGG TGGCTGGAAG TTTGGCGAAC TCCCCCCTGG CTTTCAGGCA
GTCGCCGCCA CGGAGCGCTC GCTGGGTAAT GGGGACGAGA TCTCGCGCCA CTTCGTGCTG
AGTGATGGTC TGGCGTCGGT GTCGGTCTAC GTCGAGCCGG CGGATGGCGA GAAGAGTTTC
GAGGGTACGA CCCGTGCCGG CGCCACGCAT GCCGCGGCGC GGGTGATGGC CGGGCATCAA
GTCACGGCGG TCGGCGATGT GCCCCATGTT ACGGTCCAGC AGGTGCTGGA CGCGGTCTAT
TACCAGGGCG CCGCGGGCGA CTAA
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| Protein sequence | MWRGLPLVLA ATALCLPAQV LADEASPSEW LERMTTSLHA ESYQGTFVLQ RDDRIDTIRV
VHVAEDGGYR ERLETLTGAE REILRSVDRL SAIKGARGAS GDGAQSPLGP AGAPVSLLQE
HDLYSLDIQG LDRVAGYPCT LILARARDAL RYSHRYCLHM DSALPLLSEL YDPKGKLLER
LAFTDLELSG EIAESELEPT TDQAEHIEVR ADRGHKKPQW DDDNGLGGWK FGELPPGFQA
VAATERSLGN GDEISRHFVL SDGLASVSVY VEPADGEKSF EGTTRAGATH AAARVMAGHQ
VTAVGDVPHV TVQQVLDAVY YQGAAGD
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