| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1944 |
|---|
| Symbol | |
|---|
| ID | 8807718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | - |
|---|
| Start bp | 2068206 |
|---|
| End bp | 2068973 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | pyridoxal phosphate biosynthetic protein PdxJ |
|---|
| Protein accession | YP_003461171 |
|---|
| Protein GI | 289209105 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.35633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTATC CCGCACCGCT CAAGCTGGGG GTCAACCTCG ACCACATCGC CACGATCCGC
CAGGCGCGCC ACACCCCGTA TCCCGACCTG ATGCAGGCGG TGCGCCTGGC CGAAGCCAGC
GGCGCGGACT CGATCACCCT GCATCTGCGC GAGGACCGCC GGCATATCCA GGACGACGAT
GTTTTCGGCA TCAAGCCGAA ACTCACGGTC CCGATGAATC TCGAGATGGC CGCCACCGAG
GGCATGCAGG CCATCGCATT GAAGCTGCTC CCGGAGGCCT GCTGCATCGT GCCGGAAAAG
CGCGAGGAGC TGACTACCGA GGGTGGCCTG GATGCGGCCG GACAGCTCGA GCGGCTGCGC
GATTTTGTGG CTCCGCTGAC CACGGCCGGG ATCGAGGTCT CGCTGTTCGT GGAGCCGGAT
GTGCGCCAGC TGGAGGCAGC GGTCAAGATC GGCGCCCCGG TGGTGGAGCT GCATACAGGC
GCCTACGCCA ATGCCCGTGA TGCGGCCGAG CGCGAACGCT TGCTGGCCGG GATCAACGAG
GCCGCCGCTG CCGGTCAGGC CATGGGGCTG GTGATCAACG CCGGTCATGG GCTCGATTAC
GACAATGTGC GTCCGATCGC TGCGAATCCG GTCTTTCACG AGCTGAATAT CGGCCACTCC
ATCGTGGCCC GGGCACTGTT TACGGGATTG CCGGAGGCGG TCAGCCACAT GCGCGGGCTG
ATGGACGCCG CCCGCGCAGG CCTGCCCGTC GGCCAGTACC CGGTGTGA
|
|---|
| Protein sequence | MSYPAPLKLG VNLDHIATIR QARHTPYPDL MQAVRLAEAS GADSITLHLR EDRRHIQDDD
VFGIKPKLTV PMNLEMAATE GMQAIALKLL PEACCIVPEK REELTTEGGL DAAGQLERLR
DFVAPLTTAG IEVSLFVEPD VRQLEAAVKI GAPVVELHTG AYANARDAAE RERLLAGINE
AAAAGQAMGL VINAGHGLDY DNVRPIAANP VFHELNIGHS IVARALFTGL PEAVSHMRGL
MDAARAGLPV GQYPV
|
|---|
| |