| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1893 |
|---|
| Symbol | |
|---|
| ID | 8807666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013889 |
|---|
| Strand | + |
|---|
| Start bp | 2009216 |
|---|
| End bp | 2010328 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_003461120 |
|---|
| Protein GI | 289209054 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAGACA CCAAAGACCA TGCCGCGCCG CTCGCGGAGG CGATCCGCGA GGCCAGCGTG
GCAGGGAACC GAATCGCCCT GCGCGGCGGT CGCCAGCATG GTGATCAGAG CTTCCCCGAC
GGCATCCCCA CCGGCGTACT CCAGCTGGAG AGCCACGAAC ATCGGGGGAT CGTGACCCTG
GAGCCGAGCG AACTGGTCGT CACCGTGCGC AGCGGCACCC CCGTGGTCAC CCTGGACCAG
GCCCTGGACG AGGTCGGCAT GATGCTCCCC TTCGAACCCG CGCTGGGCGC CCCCGAAGCC
ACCGTCGGTG GCATGGTCGC ACTGGGCATG TCGGGACCGC GCCGCCCGTG GGCCGCCGCA
CTGCGCGATG CCGTGCTCGG CACCCGGGTC GTGAACGGAC GCGGCGACAT CCTGCAGTTC
GGCGGCCAGG TCATGAAAAA CGTCGCAGGC TTCGATGTCT CGCGCCTGAT GTGTGGCAGC
CTGGGCGGTC TCGGGCTGAT CCTGGAGACC AGCTTCAAAT TGTTGCCGCG ACCGGCCTGC
GAGCGCTACC TGCAGCGCGA GGATGATACT GAATCGTTCA TCGCGCGCTG CAGCGCCTGG
GGCCGCACCG GGTGGCCATT CTCGGGCATC GCCTGGCACG ACGGCGTCAC CCATATCCGT
CTTGGCGGCG GCGAGGAAGC GGTGGACGAG GCCATCCAGC GTATCGACGC CGAACCGGGC
GACCCGGCCC GGGGCTTCTG GAGCGCACTG AGGGACCGCA GCCTGCCCCT GTTCACGGAC
GAACTGGCCG CCGGGGCCCG GCTGTGGCGG ATCAGCCTGC CACCGGCGAC GGAACCGCTC
GCGCTGTCCG GCGAGTGGCT GCTGAACTGG GGCGGCGCGG AGCGCTGGCT GCGCACGACG
GAACATCCCG AGACCGTGCG CCGCGCCGTA ACCGACGCCG GCGGGCACGC CCGCCTGTGG
CTCGGCGACG CCCCGGGCGT GTCCCGCCTG CACCCGCGCG GGGAGGCGCT GGAGGCCCTG
GAAGGCCGCC TGCGCGAGGC CCTGGACCCG GACGGCGTCT TCTTCGCCCC CCTGCTGCCG
AACCCCCGTT CCCGCCGGCC GCGCACGACC TAA
|
|---|
| Protein sequence | MRDTKDHAAP LAEAIREASV AGNRIALRGG RQHGDQSFPD GIPTGVLQLE SHEHRGIVTL
EPSELVVTVR SGTPVVTLDQ ALDEVGMMLP FEPALGAPEA TVGGMVALGM SGPRRPWAAA
LRDAVLGTRV VNGRGDILQF GGQVMKNVAG FDVSRLMCGS LGGLGLILET SFKLLPRPAC
ERYLQREDDT ESFIARCSAW GRTGWPFSGI AWHDGVTHIR LGGGEEAVDE AIQRIDAEPG
DPARGFWSAL RDRSLPLFTD ELAAGARLWR ISLPPATEPL ALSGEWLLNW GGAERWLRTT
EHPETVRRAV TDAGGHARLW LGDAPGVSRL HPRGEALEAL EGRLREALDP DGVFFAPLLP
NPRSRRPRTT
|
|---|
| |