Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1812 |
Symbol | |
ID | 8807584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1927495 |
End bp | 1927830 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | protein of unknown function DUF1568 |
Protein accession | YP_003461039 |
Protein GI | 289208973 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.001052 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000000000744567 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCCGAC CCCTACGCCT GGAGTACCCG TGGGCGCTCT ATCACGTCAC CGCACGCGGC GACCGACGCG GATGGATCTA CCAAGATTCG GTCGATCATC AGCGATTTCT CGACACCCTG GCTCAAGCCG TACAACGGTA TAACTGGGTA CTGTCAGCGT ACTGCCTGAT GGGAAATCAT TATCACCTGC TCGTTGAAAC GCCGGACGCG AACCTCTCCC GCGGTATGCA GTGGCTCAAT GGCGTCTACA CACAGCGGGG GCTTGGGGGT CAGACCTTGC CTTTTGCTCT CTGGCGCGAA CCACGGCAAC ACGGGTGGCA TCGCACACCA CTTTAA
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Protein sequence | MVRPLRLEYP WALYHVTARG DRRGWIYQDS VDHQRFLDTL AQAVQRYNWV LSAYCLMGNH YHLLVETPDA NLSRGMQWLN GVYTQRGLGG QTLPFALWRE PRQHGWHRTP L
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