Gene TK90_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_1771 
Symbol 
ID8807543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013889 
Strand
Start bp1890310 
End bp1891035 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content70% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_003460998 
Protein GI289208932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0442667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.7301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCCT CCATCCCCAA CTCCACGCCC CTGGCCGGCG TACGCTGCCT GACCTTCGAC 
CTCGACGACA CCTTGTGGCC AGTGATGCCG GTCATCCACC ACGCGGAGGC GCGCTTCTAC
GCCTGGCTGC GGGAGCATGC ACCGGTCGTC TGCGAGCGCT TCGATCCGCA GGAACTGATC
GCCGCGCGCA CCACCTTCAT GCGCGCCGCG CCACCGGAGG AGCGCCACGA CCTGACCCGC
CTGCGCAAGC GCTGGCTGCG CGAGCTGGCC ACGGACTGCG GCTGTTGTCC CGACCGCCTG
TCGGGCGAGG GGTTCGAGGT GTTCTGGCAT GCACGCAACG AGGTGACGCC GTTCCCCGAG
GCGGACGGCG TCCTCGCGAC CCTGGCGCGG CACTTCCGGC TGGGCGCCAT CAGCAACGGC
AATGCCGATG TCTTTCGCAC CCCCCTGGGG CGCCATTTCG ACTTCGCGAT CGCGGCGGGC
GCGGCGGGCG CGGCCAAGCC CGATCCGGTG ATCTTCGCGC AGGCCCGCGA ACAGGCCGGC
GTCAACGCCG AAAATATTCT GCATGTGGGG GATGACAGCA CCAGCGACGT GCTCGGGGCT
TTGAACGCAG GGTTTCAGGC CGCCTGGTTC AACCCCGACG CGCTGCCCTG GGAACACGGG
CGGCCCCGGC CGGTGCTGAC GCTGGGGCGG CTGGGCCAGC TGCCGCGGCA TCTCGGCATC
GACTAG
 
Protein sequence
MRSSIPNSTP LAGVRCLTFD LDDTLWPVMP VIHHAEARFY AWLREHAPVV CERFDPQELI 
AARTTFMRAA PPEERHDLTR LRKRWLRELA TDCGCCPDRL SGEGFEVFWH ARNEVTPFPE
ADGVLATLAR HFRLGAISNG NADVFRTPLG RHFDFAIAAG AAGAAKPDPV IFAQAREQAG
VNAENILHVG DDSTSDVLGA LNAGFQAAWF NPDALPWEHG RPRPVLTLGR LGQLPRHLGI
D