Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_1771 |
Symbol | |
ID | 8807543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013889 |
Strand | + |
Start bp | 1890310 |
End bp | 1891035 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_003460998 |
Protein GI | 289208932 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0442667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.7301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATCCT CCATCCCCAA CTCCACGCCC CTGGCCGGCG TACGCTGCCT GACCTTCGAC CTCGACGACA CCTTGTGGCC AGTGATGCCG GTCATCCACC ACGCGGAGGC GCGCTTCTAC GCCTGGCTGC GGGAGCATGC ACCGGTCGTC TGCGAGCGCT TCGATCCGCA GGAACTGATC GCCGCGCGCA CCACCTTCAT GCGCGCCGCG CCACCGGAGG AGCGCCACGA CCTGACCCGC CTGCGCAAGC GCTGGCTGCG CGAGCTGGCC ACGGACTGCG GCTGTTGTCC CGACCGCCTG TCGGGCGAGG GGTTCGAGGT GTTCTGGCAT GCACGCAACG AGGTGACGCC GTTCCCCGAG GCGGACGGCG TCCTCGCGAC CCTGGCGCGG CACTTCCGGC TGGGCGCCAT CAGCAACGGC AATGCCGATG TCTTTCGCAC CCCCCTGGGG CGCCATTTCG ACTTCGCGAT CGCGGCGGGC GCGGCGGGCG CGGCCAAGCC CGATCCGGTG ATCTTCGCGC AGGCCCGCGA ACAGGCCGGC GTCAACGCCG AAAATATTCT GCATGTGGGG GATGACAGCA CCAGCGACGT GCTCGGGGCT TTGAACGCAG GGTTTCAGGC CGCCTGGTTC AACCCCGACG CGCTGCCCTG GGAACACGGG CGGCCCCGGC CGGTGCTGAC GCTGGGGCGG CTGGGCCAGC TGCCGCGGCA TCTCGGCATC GACTAG
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Protein sequence | MRSSIPNSTP LAGVRCLTFD LDDTLWPVMP VIHHAEARFY AWLREHAPVV CERFDPQELI AARTTFMRAA PPEERHDLTR LRKRWLRELA TDCGCCPDRL SGEGFEVFWH ARNEVTPFPE ADGVLATLAR HFRLGAISNG NADVFRTPLG RHFDFAIAAG AAGAAKPDPV IFAQAREQAG VNAENILHVG DDSTSDVLGA LNAGFQAAWF NPDALPWEHG RPRPVLTLGR LGQLPRHLGI D
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