| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1592 |
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| Symbol | |
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| ID | 8807361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1693379 |
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| End bp | 1695490 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_003460825 |
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| Protein GI | 289208759 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGG CGCATACGGC AACCGAAACC ATCCCCAGCC TGCCACAGGC CCTGACGTCC
GTTCTCGATG CGGGCCAGGC GGCGGAGGCC GATTTCGAGG CCCTCAGCCG TGCCATTCTG
CGCGACACCG GCATGACCAC ACGCCTCCTC GCGGCAGCCA ACTCCCCGTT CTATTACCGC
GGCTCGCCGT GTCGCACCAT CGATAGAGCC CTTTTCAGCC TGGGGCTGGA CACCGTGCGC
AGCCTCGCCC TGACCGCCGC GATCCAGCAG CTTTTCGGCC GCTACCAGCC CAAGCGCACC
AGCACGCTTC GGACCATCTG GCGCCGTGCG CTGACCACCG CCATGCTCGG CCAGGTCCTC
GCCTCCCTGA CACGCCACCC ACGGCCCGAA GAGGCGTATC TGTCAGGGCT TCTGGTTGAT
CTCGGCAAGC TGATGCGACT GGCGTCCGAC GAAGCGCGCT ACTGGCCGCT GCTCGAGGCC
AGCAGCGACC ACCGCGAACT GGTCTCCCGT GAACAGGCGA CCTACGGTCA ACACCATGCA
GAACTGGCCG CCGAACACCT GGACCAATGG GGCCTGGACG GCTTCGTCAC CGATGCGGTG
CGTTTCCACC TCGAACCCAC GGCACAAGTG CGCGATGCAC ACCACCTAGT GAAGATTGTC
CATCTCGCCA GCCGACTTGG CGACGAACCA CCCGACGCCA TCGGCGACCC GGCCCTGGCA
GCCGCCCACG ACCTGTTTGG GCTCAATGAC GGCCTGACCC GGGAACTGCG CAACCGCATC
GAAGACGATG TCACCCGGGT TGCCGGTTCC CTGGGTATTG AGCTGGACGC GGGAGCCGAA
ACCGCGAATA TCGAGGCACA TCACCCCGAT CAGGCGGCGC GCGAGGCGCT GGGGATGCGT
GTCCGCGACC TCACCGAGCT GGAGCGGCTG TCCGGCGAGC TTCGCGCCTC GCGGACCCCC
CGAGAACATT GTCTGGCCGC CCAGCGAACG CTGTTTCTCA CCCTGGGTGT CGAACACAGC
CTGATGTTCC TGACAGACGC GGACGGTGCA TCGGTCTCCG CCTGGCTCGG CGAGGAAGAC
GAGCCCGACT TCACCCTGCC CCTGCTGCCG GGACGGAGCC TTGTGACCGA CACCCTGCTG
GACCGCGAGA TGCGCCAGCA CAAACCCGAT GGCGAGACAC CTACACCGGT CATCGACCAG
CAGTTGTTCC GGCTCTGCGG TGCCGAGGTG ATCTGGGCAT TCCCTCTGCT GGCGGATGCC
AACTCCTCGC CCGCAGGGGT GCTGATCCTG GGACTGGACC GAGAACGTGC CCAGACCCTG
GAACCCCGAA CCGGATTTGT CCGGGCCCTG GCGCGAGAGA TTGCACGCGT GCTGTGCACC
TCGCAGTCCG ACCCGCCCGA GCAAGCGCAC ACCGACGATA CGACGCAAGA GCGAATCCGC
GAGACGCTGC ACGAGGCGGG CAACCCCCTC AGCATCATCC AGAATTATCT GGGTGTGTTG
AACACAAAGC TGGGCGATGA GCACGAGGCC AGCCAGGAAC TGGCCCTGAT CAAGGAGGAG
ATTGATCGCG TCGGCCGCAT CCTGCTGCGT CTAAAGGAAC CCGACCAGGC AGTGGACGGG
CCGCCATCCT CGCTTAATCG GCTGGTCCAG GACGTGGCCG ACATCGTGGA CCGCTCTCTT
TGCCACACGC GGGGCATCCG CCTGGAACTG GATCTGGCAC CCGGCGATCC GCCCTTGTCT
GTCTCCAGCG ACCATGTGCG CCAGATTCTG ACGAACCTGC TCAAAAACGC CGCCGAGGCC
CTGCAGCCGG GGGGCGTCAT TCGGCTGCAG ACCCGCGACC CCGAGAGCTT CAATGGGACC
AGCGTGGTGG CACTGGTGGT CGCCGACGAC GGCCCCGGGC TTCCACCGGA GGTCCGCGCG
GCCCATTATC GCCCGGTAGA ATCCGCCAAG GGCGGGGGGC ACGCCGGGCT AGGCCTGAGT
ATTGTCCGCC GCCTGGCGGA CGAGATCGGC GCTCACATCC AGTGCGACAG CGACCGCGAA
GGAACGCGGT TCGAGATTCG GCTCCCCCAT CGCGAGGCCG AAACCGGAGC CCTCGGGGCG
GGACAGGGAT AG
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| Protein sequence | MATAHTATET IPSLPQALTS VLDAGQAAEA DFEALSRAIL RDTGMTTRLL AAANSPFYYR
GSPCRTIDRA LFSLGLDTVR SLALTAAIQQ LFGRYQPKRT STLRTIWRRA LTTAMLGQVL
ASLTRHPRPE EAYLSGLLVD LGKLMRLASD EARYWPLLEA SSDHRELVSR EQATYGQHHA
ELAAEHLDQW GLDGFVTDAV RFHLEPTAQV RDAHHLVKIV HLASRLGDEP PDAIGDPALA
AAHDLFGLND GLTRELRNRI EDDVTRVAGS LGIELDAGAE TANIEAHHPD QAAREALGMR
VRDLTELERL SGELRASRTP REHCLAAQRT LFLTLGVEHS LMFLTDADGA SVSAWLGEED
EPDFTLPLLP GRSLVTDTLL DREMRQHKPD GETPTPVIDQ QLFRLCGAEV IWAFPLLADA
NSSPAGVLIL GLDRERAQTL EPRTGFVRAL AREIARVLCT SQSDPPEQAH TDDTTQERIR
ETLHEAGNPL SIIQNYLGVL NTKLGDEHEA SQELALIKEE IDRVGRILLR LKEPDQAVDG
PPSSLNRLVQ DVADIVDRSL CHTRGIRLEL DLAPGDPPLS VSSDHVRQIL TNLLKNAAEA
LQPGGVIRLQ TRDPESFNGT SVVALVVADD GPGLPPEVRA AHYRPVESAK GGGHAGLGLS
IVRRLADEIG AHIQCDSDRE GTRFEIRLPH REAETGALGA GQG
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