| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1510 |
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| Symbol | |
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| ID | 8807276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1607838 |
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| End bp | 1608716 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_003460750 |
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| Protein GI | 289208684 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.829612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.012089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGAC ATCCCGACAT CCGTGCCGCC TACCGCCACT GCCGGGTCCG CGCCACCGCG
CACTACGAGA ACTTCCCGGT CGCCTCCTGG CTGCTGCCCG CGCGACTGCG CGGACCCGTC
GCCGCGATCT ACTGCTTCGC CCGCGATGCC GACGACCTCG CCGACGAGGA CCAGCGCCCC
GTCGACGAGC GACGGGCCGA CCTGGTCGCC ATGCAGGAAC GCGTGCAGAT TCTCGAAGAT
CCGGCCGCGG AGTCCGAGCC GGAATGGATC GCGCTGGCTG ATGCGCGGCA GCGCTTCGGC
CTGCCCGCTG CCCCGTTTGT CGATCTGGTC GACGCCTTCA TCCAGGACCT GGAACAAACG
CGCTACGCCA CCTTTGGCGA GGTCGTGGAG TACTGCCGCC GCTCCGCCAA CCCGGTCGGC
CGGCTGATGC TGTACCTCGA CGGCAACCCC ACCGAGGAGA TGATCGGCTA CTCCGACGCG
GTCTGCTCGG CCCTGCAGCT GATCAACTTC TATCAGGACC TGCACCAGGA CCTCACCGAG
AACGACCGGA TCTATCTGCC ACAGGACGAG ATGGCGCAAT ACGGCGTCAG CGAAGAGACG
ATCGCGGCCG GCCAGACGAC CTTTCAGTTA CGCAACCTGA TGCAGTTTCA GTACGCCCGC
GCCGATCGCC TGCTGCGCGC CGGAGCACCG CTCGGCGGCA TGCTGCGCGG GCGCATGGGC
CTGGAGATCC GCGCCATCAT CAACGGCGGC GCCCGCGTAC TCTGGCGCCT GCGCCAGCAG
GACGACGTCT TCGCCCGCCC GCGCCTGCGC GCCCGCGACG CCTGGGTCAT CCTCGCCCAC
AGCCTGCGCC CGCGCCGCCG CAAGCGAAAC GCTGATTAG
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| Protein sequence | MAGHPDIRAA YRHCRVRATA HYENFPVASW LLPARLRGPV AAIYCFARDA DDLADEDQRP
VDERRADLVA MQERVQILED PAAESEPEWI ALADARQRFG LPAAPFVDLV DAFIQDLEQT
RYATFGEVVE YCRRSANPVG RLMLYLDGNP TEEMIGYSDA VCSALQLINF YQDLHQDLTE
NDRIYLPQDE MAQYGVSEET IAAGQTTFQL RNLMQFQYAR ADRLLRAGAP LGGMLRGRMG
LEIRAIINGG ARVLWRLRQQ DDVFARPRLR ARDAWVILAH SLRPRRRKRN AD
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